Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT4000 and BT4001 are separated by 0 nucleotides BT4001 and BT4002 are separated by 11 nucleotides BT4002 and BT4003 are separated by 177 nucleotides
BT4000: BT4000 - hypothetical protein (NCBI ptt file), at 5,213,104 to 5,213,991
BT4000
BT4001: BT4001 - putative chromosome partitioning protein parB (NCBI ptt file), at 5,213,992 to 5,214,882
BT4001
BT4002: BT4002 - ATPase, ParA family (NCBI ptt file), at 5,214,894 to 5,215,841
BT4002
BT4003: BT4003 - stationary-phase survival protein SurE (NCBI ptt file), at 5,216,019 to 5,216,798
BT4003
Position (kb) 5214
5215
5216 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 5215.744 kb on - strand, within BT4002 at 5215.764 kb on - strand at 5215.836 kb on - strand at 5215.836 kb on - strand at 5215.836 kb on - strand at 5215.837 kb on + strand at 5215.838 kb on - strand at 5215.842 kb on - strand at 5215.858 kb on + strand at 5215.888 kb on + strand at 5215.907 kb on + strand at 5215.908 kb on - strand at 5215.950 kb on + strand at 5215.951 kb on - strand at 5215.997 kb on + strand at 5216.018 kb on + strand at 5216.072 kb on + strand at 5216.224 kb on + strand, within BT4003 at 5216.224 kb on + strand, within BT4003 at 5216.228 kb on + strand, within BT4003 at 5216.460 kb on + strand, within BT4003 at 5216.462 kb on + strand, within BT4003 at 5216.462 kb on + strand, within BT4003 at 5216.473 kb on + strand, within BT4003 at 5216.627 kb on + strand, within BT4003 at 5216.801 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) remove 5,215,744 - BT4002 0.90 -4.3 5,215,764 - -4.0 5,215,836 - -2.5 5,215,836 - -4.0 5,215,836 - -1.6 5,215,837 + -1.0 5,215,838 - -1.8 5,215,842 - -1.0 5,215,858 + -2.0 5,215,888 + -1.0 5,215,907 + -0.6 5,215,908 - -3.4 5,215,950 + +0.6 5,215,951 - -1.6 5,215,997 + -1.0 5,216,018 + -0.4 5,216,072 + -2.4 5,216,224 + BT4003 0.26 -0.8 5,216,224 + BT4003 0.26 -2.0 5,216,228 + BT4003 0.27 -1.0 5,216,460 + BT4003 0.57 -3.0 5,216,462 + BT4003 0.57 -0.0 5,216,462 + BT4003 0.57 -1.0 5,216,473 + BT4003 0.58 -2.4 5,216,627 + BT4003 0.78 +1.6 5,216,801 + +0.3
Or see this region's nucleotide sequence