Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3642

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
4,718,060	-				-2.0
4,718,164	+				-0.0
4,718,222	+		BT3641	0.15	-1.0
4,718,222	+		BT3641	0.15	-3.4
4,718,223	-		BT3641	0.15	+2.0
4,718,223	-				-1.6
4,718,223	-		BT3641	0.15	-1.2
4,718,354	+		BT3641	0.29	-2.0
4,718,427	+		BT3641	0.37	-0.0
4,718,428	-				-0.0
4,718,439	+		BT3641	0.39	-0.0
4,718,463	+		BT3641	0.41	-0.0
4,718,486	-		BT3641	0.44	-3.5
4,718,495	+		BT3641	0.45	-0.0
4,718,512	+		BT3641	0.46	+1.5
4,718,516	-		BT3641	0.47	-1.4
4,718,532	+		BT3641	0.49	+1.5
4,718,563	+		BT3641	0.52	+1.0
4,718,563	+		BT3641	0.52	-2.4
4,718,563	+		BT3641	0.52	+0.6
4,718,563	+		BT3641	0.52	-0.5
4,718,563	+		BT3641	0.52	+0.5
4,718,567	+		BT3641	0.52	-1.3
4,718,608	+		BT3641	0.57	+2.0
4,718,780	+		BT3641	0.75	+1.0
4,718,781	-		BT3641	0.75	-1.6
4,718,844	-		BT3641	0.82	+1.0
4,718,850	-		BT3641	0.83	-1.0
4,718,930	+				+2.1
4,718,930	+				-0.7
4,718,930	+				+0.5
4,718,930	+				+0.4
4,718,931	-				+2.5
4,718,932	+				-0.5
4,718,932	+				-1.3
4,718,933	-				-2.7
4,718,938	+				-0.0
4,718,985	+				+2.4
4,719,011	-				-2.4
4,719,021	-				+2.0
4,719,039	-				+6.4
4,719,039	-				+5.7
4,719,070	+				+6.1
4,719,076	-				+4.3
4,719,078	+				+3.0
4,719,080	+				+4.3
4,719,080	+				+6.6
4,719,232	-		BT3642	0.16	+3.5
4,719,303	+		BT3642	0.21	+4.7
4,719,304	-		BT3642	0.22	+6.6
4,719,311	+		BT3642	0.22	+6.0
4,719,311	+		BT3642	0.22	+4.7
4,719,312	-		BT3642	0.22	+5.8
4,719,312	-		BT3642	0.22	+5.1
4,719,361	-		BT3642	0.26	+8.1
4,719,433	-		BT3642	0.31	+6.3
4,719,436	+		BT3642	0.31	+5.2
4,719,437	-		BT3642	0.31	-2.0
4,719,455	+		BT3642	0.33	+7.0
4,719,456	-		BT3642	0.33	+6.6
4,719,456	-		BT3642	0.33	+6.6
4,719,496	-		BT3642	0.36	+7.1
4,719,518	+		BT3642	0.37	+6.9
4,719,543	+		BT3642	0.39	+6.8
4,719,544	-		BT3642	0.39	+6.5
4,719,544	-		BT3642	0.39	+4.5
4,719,544	-		BT3642	0.39	+5.5
4,719,544	-		BT3642	0.39	+6.1
4,719,573	-		BT3642	0.41	+5.5
4,719,603	-		BT3642	0.43	+5.7
4,719,603	-		BT3642	0.43	+4.0
4,719,606	+		BT3642	0.44	+1.8
4,719,607	-		BT3642	0.44	+4.1
4,719,607	-		BT3642	0.44	+6.6
4,719,608	+		BT3642	0.44	+3.6
4,719,668	-		BT3642	0.48	+4.2
4,719,696	-		BT3642	0.50	+4.3
4,719,696	-		BT3642	0.50	+5.5
4,719,814	-		BT3642	0.59	+3.4
4,719,816	+		BT3642	0.59	+6.4
4,719,817	-		BT3642	0.59	+6.4
4,719,817	-		BT3642	0.59	+4.5
4,719,828	+		BT3642	0.60	+5.8
4,719,902	+		BT3642	0.65	+2.2
4,719,903	-		BT3642	0.65	+5.2
4,720,030	+		BT3642	0.74	+6.4
4,720,031	-		BT3642	0.75	+6.0
4,720,031	-		BT3642	0.75	+4.3
4,720,031	-		BT3642	0.75	+5.1
4,720,037	-		BT3642	0.75	+5.6
4,720,069	+		BT3642	0.77	+4.8
4,720,234	-				+4.6
4,720,245	+				+4.7
4,720,246	-				+3.8
4,720,247	+				+7.4
4,720,335	+				+4.9
4,720,335	+				+6.2
4,720,336	-				+6.0
4,720,336	-				+5.0
4,720,415	+				+6.7
4,720,483	-				-1.0
4,720,487	+				+1.0
4,720,492	+				-0.6
4,720,497	+				-2.4
4,720,592	+		BT3643	0.28	-2.1
4,720,593	-		BT3643	0.28	-3.4
4,720,614	+		BT3643	0.33	-0.6
4,720,640	+		BT3643	0.40	+1.0
4,720,721	+		BT3643	0.61	+0.2
4,720,837	+				-3.8
4,720,838	-				-1.3
4,720,841	-				-2.0
4,720,882	-				-0.0
4,720,884	-				-0.3
4,720,887	-				+0.2
4,720,893	+				-0.6
4,720,893	+				-0.9
4,720,893	+				-1.0
4,721,028	-				-2.4
4,721,030	+				+0.5
4,721,031	-				+1.5
4,721,033	-				+1.0
4,721,033	-				-1.2
4,721,036	+				-1.3
4,721,037	-				+0.5
4,721,037	-				-1.9