Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2986

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
3,763,732	-		BT2984	0.70	-0.6
3,763,747	-		BT2984	0.72	-2.5
3,763,748	+		BT2984	0.72	-1.6
3,763,748	+		BT2984	0.72	-1.1
3,763,748	+		BT2984	0.72	-1.5
3,763,748	+		BT2984	0.72	-1.1
3,763,783	-		BT2984	0.75	-2.2
3,763,783	-		BT2984	0.75	-2.8
3,763,794	+		BT2984	0.77	+2.3
3,763,794	+		BT2984	0.77	-1.1
3,763,794	+		BT2984	0.77	-3.5
3,763,795	-		BT2984	0.77	-0.2
3,763,795	-		BT2984	0.77	-1.4
3,763,814	-		BT2984	0.79	-1.2
3,763,814	-		BT2984	0.79	-3.0
3,763,927	-				-0.2
3,764,067	+				-1.1
3,764,068	-				-2.7
3,764,068	-				-0.1
3,764,097	-				-0.3
3,764,100	-				+0.5
3,764,120	+				-2.4
3,764,152	+				-0.1
3,764,172	+		BT2985	0.13	-3.8
3,764,174	+		BT2985	0.14	-1.6
3,764,175	-		BT2985	0.14	-3.5
3,764,176	+		BT2985	0.14	-0.3
3,764,176	+		BT2985	0.14	-2.1
3,764,176	+		BT2985	0.14	-1.6
3,764,177	-		BT2985	0.14	-1.1
3,764,177	-		BT2985	0.14	-2.7
3,764,177	-		BT2985	0.14	-2.1
3,764,178	+		BT2985	0.15	-1.0
3,764,183	+		BT2985	0.16	-0.5
3,764,221	-		BT2985	0.24	-1.1
3,764,224	+		BT2985	0.25	+0.2
3,764,224	+		BT2985	0.25	-1.1
3,764,225	-		BT2985	0.25	-0.5
3,764,236	-		BT2985	0.28	-1.9
3,764,339	+		BT2985	0.51	-0.1
3,764,340	-		BT2985	0.51	-2.9
3,764,404	-		BT2985	0.65	-1.6
3,764,404	-		BT2985	0.65	-3.5
3,764,404	-		BT2985	0.65	-0.7
3,764,418	+		BT2985	0.68	-1.6
3,764,454	+		BT2985	0.76	-3.1
3,764,490	+		BT2985	0.84	-1.6
3,764,491	-		BT2985	0.85	-1.6
3,764,491	-		BT2985	0.85	-1.1
3,764,491	-		BT2985	0.85	-0.1
3,764,531	-				-2.4
3,764,532	+				-0.1
3,764,532	+				+0.4
3,764,533	-				-1.9
3,764,533	-				-2.6
3,764,560	+				-1.6
3,764,561	-				-0.8
3,764,566	-				+0.4
3,764,635	-				+0.4
3,764,683	-				-1.2
3,764,690	-				-3.2
3,764,710	-				-0.7
3,764,710	-				-3.2
3,764,719	-				-0.3
3,764,743	+				-1.1
3,764,800	+		BT2986	0.15	-1.1
3,764,802	+		BT2986	0.16	-1.5
3,764,819	+		BT2986	0.19	-0.9
3,764,826	-		BT2986	0.20	-2.9
3,764,857	-		BT2986	0.25	-0.1
3,764,857	-		BT2986	0.25	-2.6
3,764,861	+		BT2986	0.26	+1.5
3,764,937	+		BT2986	0.39	-2.4
3,764,958	-		BT2986	0.42	-3.0
3,764,967	+		BT2986	0.44	-2.3
3,764,970	+		BT2986	0.44	-2.3
3,764,988	+		BT2986	0.47	-3.1
3,764,989	-		BT2986	0.47	+0.0
3,764,990	+		BT2986	0.48	-1.1
3,765,023	+		BT2986	0.53	-2.9
3,765,023	+		BT2986	0.53	+0.4
3,765,024	-		BT2986	0.53	-0.3
3,765,024	-				-0.3
3,765,115	-		BT2986	0.69	-2.4
3,765,130	-		BT2986	0.71	-2.4
3,765,155	-		BT2986	0.76	-1.6
3,765,192	-		BT2986	0.82	-0.1
3,765,231	+		BT2986	0.89	-2.4
3,765,235	-		BT2986	0.89	-3.1
3,765,278	-				-0.8
3,765,278	-				-0.1
3,765,295	+				-0.1
3,765,329	+				-1.6
3,765,329	+				-0.7
3,765,330	-				-2.1
3,765,331	+				-1.6
3,765,331	+				+0.4
3,765,331	+				-0.1
3,765,368	-				-0.7
3,765,376	+				+0.5
3,765,380	+				-0.7
3,765,380	+				-2.6
3,765,381	-				-0.6
3,765,386	+				-2.6
3,765,386	+				-1.4
3,765,387	-				-0.9
3,765,424	-				-2.6
3,765,464	-				-2.0
3,765,487	+				-1.1
3,765,493	+				+2.3
3,765,494	-				-0.9
3,765,503	+				-0.8
3,765,504	-				-0.8
3,765,517	+				-1.1
3,765,520	-				-2.1
3,765,520	-				-0.6
3,765,574	+				-0.6
3,765,575	-				-1.0
3,765,576	+				-0.6
3,765,637	-				-0.3
3,765,671	+				-1.6
3,765,671	+				+1.3
3,765,671	+				-0.9
3,765,688	+				-1.1
3,765,745	+				-3.1
3,765,746	-				-0.5
3,765,772	-				-1.5
3,765,788	+				-0.5
3,765,793	-				-2.2
3,765,797	+				-0.7
3,765,811	+				-0.3
3,765,854	+				-1.7
3,765,872	+				+0.9
3,765,873	-				-0.1
3,765,874	+				-2.6
3,765,899	-				-0.3
3,765,899	-				-1.6
3,765,901	-				+0.5
3,765,919	-				-0.5
3,765,978	-				-0.4
3,765,980	-				-1.7
3,765,980	-				-0.1
3,766,027	+				-2.1
3,766,034	+				-1.4
3,766,035	-				+1.4
3,766,048	+				+0.1
3,766,066	+				-1.6
3,766,097	-		BT2987	0.16	-1.1
3,766,097	-		BT2987	0.16	+1.5
3,766,128	+		BT2987	0.27	+0.9
3,766,135	+		BT2987	0.29	+0.5
3,766,135	+		BT2987	0.29	-1.1
3,766,140	+		BT2987	0.31	-1.5
3,766,217	-		BT2987	0.57	-0.4
3,766,260	-		BT2987	0.71	-0.1
3,766,289	-		BT2987	0.81	-1.8