Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2880

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
3,599,225	-		BT2879	0.21	-0.1
3,599,247	-		BT2879	0.23	-1.4
3,599,256	+		BT2879	0.24	-2.0
3,599,257	-		BT2879	0.24	+0.9
3,599,309	+		BT2879	0.28	-0.4
3,599,309	+		BT2879	0.28	-1.7
3,599,357	+		BT2879	0.32	-3.4
3,599,394	-		BT2879	0.35	-0.5
3,599,397	+		BT2879	0.35	-2.9
3,599,398	-		BT2879	0.35	-2.0
3,599,402	-		BT2879	0.35	-0.1
3,599,431	-		BT2879	0.38	-1.1
3,599,449	+		BT2879	0.39	-0.8
3,599,490	+		BT2879	0.42	+1.2
3,599,495	-		BT2879	0.43	-0.4
3,599,571	+		BT2879	0.49	-2.1
3,599,589	+		BT2879	0.50	+0.5
3,599,589	+		BT2879	0.50	-1.7
3,599,589	+		BT2879	0.50	-3.1
3,599,623	+		BT2879	0.53	-0.8
3,599,641	+		BT2879	0.54	-0.8
3,599,641	+		BT2879	0.54	-0.1
3,599,642	-		BT2879	0.54	-0.7
3,599,646	+		BT2879	0.55	-2.6
3,599,688	+		BT2879	0.58	-1.1
3,599,689	-		BT2879	0.58	-0.4
3,599,689	-		BT2879	0.58	+0.3
3,599,728	-		BT2879	0.61	-1.1
3,599,761	+		BT2879	0.64	-0.1
3,599,761	+		BT2879	0.64	-0.8
3,599,762	-		BT2879	0.64	-1.1
3,599,767	-		BT2879	0.64	-0.5
3,599,778	-		BT2879	0.65	-2.1
3,599,816	+		BT2879	0.68	-1.1
3,599,817	-		BT2879	0.68	-2.7
3,599,829	+		BT2879	0.69	-3.0
3,599,841	+		BT2879	0.70	-1.1
3,599,913	-		BT2879	0.76	-1.0
3,599,918	+		BT2879	0.76	+0.3
3,599,923	-		BT2879	0.76	-1.7
3,599,923	-		BT2879	0.76	-1.4
3,600,019	-		BT2879	0.84	+0.5
3,600,027	+		BT2879	0.85	+0.5
3,600,055	-		BT2879	0.87	-2.8
3,600,127	+				-3.1
3,600,153	+				+1.5
3,600,167	+				-0.3
3,600,167	+				-0.1
3,600,171	+				-1.3
3,600,204	+				-1.5
3,600,205	-				-2.0
3,600,206	+				-2.8
3,600,207	-				-1.7
3,600,208	+				-1.7
3,600,210	+				-1.8
3,600,211	-				-0.7
3,600,230	+				-0.2
3,600,230	+				-0.6
3,600,238	+				-0.6
3,600,238	+				-1.7
3,600,239	-				-1.7
3,600,239	-				-1.1
3,600,310	+		BT2880	0.10	-0.1
3,600,310	+		BT2880	0.10	+0.2
3,600,326	+		BT2880	0.12	-0.2
3,600,327	-		BT2880	0.12	-0.7
3,600,327	-		BT2880	0.12	-3.2
3,600,331	+		BT2880	0.12	-1.7
3,600,418	+		BT2880	0.21	-2.8
3,600,444	-		BT2880	0.23	-1.5
3,600,444	-		BT2880	0.23	-0.7
3,600,445	+		BT2880	0.23	-2.1
3,600,446	-		BT2880	0.23	-3.9
3,600,446	-		BT2880	0.23	-0.3
3,600,448	+		BT2880	0.24	-2.9
3,600,449	-		BT2880	0.24	-0.1
3,600,449	-		BT2880	0.24	-1.1
3,600,450	+		BT2880	0.24	-0.7
3,600,450	+		BT2880	0.24	-0.7
3,600,451	-		BT2880	0.24	-1.7
3,600,484	-		BT2880	0.27	-2.0
3,600,484	-		BT2880	0.27	-0.7
3,600,513	+		BT2880	0.30	-0.8
3,600,572	+		BT2880	0.36	-0.7
3,600,630	+		BT2880	0.41	-0.1
3,600,650	+		BT2880	0.43	-0.1
3,600,652	+		BT2880	0.43	-1.1
3,600,652	+		BT2880	0.43	-1.8
3,600,653	-		BT2880	0.43	+0.4
3,600,799	-		BT2880	0.58	-1.7
3,600,799	-		BT2880	0.58	-1.1
3,600,819	+		BT2880	0.60	-2.5
3,600,821	+		BT2880	0.60	-0.5
3,600,833	+		BT2880	0.61	-0.1
3,600,852	+		BT2880	0.63	-1.0
3,600,879	-		BT2880	0.65	-0.1
3,600,880	+		BT2880	0.65	-1.1
3,600,950	-		BT2880	0.72	-0.5
3,600,950	-		BT2880	0.72	+0.1
3,600,950	-		BT2880	0.72	-0.1
3,600,950	-		BT2880	0.72	-0.1
3,600,967	+		BT2880	0.74	-0.7
3,601,002	-		BT2880	0.77	-1.7
3,601,002	-		BT2880	0.77	-0.1
3,601,002	-		BT2880	0.77	+0.7
3,601,077	+		BT2880	0.84	-1.7
3,601,078	-		BT2880	0.85	-0.1
3,601,078	-		BT2880	0.85	-0.0
3,601,079	+		BT2880	0.85	-1.8
3,601,080	-		BT2880	0.85	-2.3
3,601,114	+		BT2880	0.88	-4.3
3,601,168	+				-0.5
3,601,224	+				-0.7
3,601,225	-				-2.4
3,601,225	-				-1.5
3,601,227	+				-2.7
3,601,227	+				-0.7
3,601,228	-				-0.7
3,601,427	-		BT2881	0.27	-2.8
3,601,488	+		BT2881	0.35	-4.0
3,601,489	-		BT2881	0.36	-2.5
3,601,489	-		BT2881	0.36	+1.5
3,601,565	+		BT2881	0.46	-1.1
3,601,594	+		BT2881	0.50	-0.5
3,601,594	+		BT2881	0.50	+0.3
3,601,595	-		BT2881	0.50	-0.1
3,601,600	-		BT2881	0.51	+0.2
3,601,680	-		BT2881	0.62	-0.8
3,601,680	-		BT2881	0.62	-0.1
3,601,680	-		BT2881	0.62	-2.1
3,601,681	+		BT2881	0.62	-2.4
3,601,693	-		BT2881	0.64	+0.9
3,601,711	+		BT2881	0.67	+0.3
3,601,711	+		BT2881	0.67	-1.1
3,601,726	+		BT2881	0.69	-1.1
3,601,744	+		BT2881	0.71	-1.1
3,601,745	-		BT2881	0.71	-1.1
3,601,749	+		BT2881	0.72	-0.3
3,601,752	-		BT2881	0.72	-0.1
3,601,763	+		BT2881	0.74	+0.9
3,601,817	-		BT2881	0.81	-0.4
3,601,841	-		BT2881	0.85	-0.1
3,601,841	-		BT2881	0.85	-3.4
3,601,869	+		BT2881	0.89	+2.2
3,601,869	+		BT2881	0.89	-1.1
3,601,897	-				-1.8
3,601,897	-				-0.7
3,601,897	-				-0.8
3,601,933	-				-2.7
3,601,942	+				-1.7
3,601,942	+				-3.0
3,601,942	+				-2.2
3,601,945	-				-0.5
3,601,982	+				+0.7
3,601,983	-				-0.1
3,601,983	-				-1.1
3,602,114	-		BT2882	0.13	-0.1
3,602,134	-		BT2882	0.15	-1.4
3,602,139	+		BT2882	0.16	-2.7
3,602,140	-		BT2882	0.16	-2.1
3,602,232	-		BT2882	0.25	-0.1
3,602,236	-		BT2882	0.26	+0.2
3,602,236	-		BT2882	0.26	-1.1