Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2538

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
3,170,605	+		BT2536	0.70	-2.5
3,170,606	-		BT2536	0.70	-2.6
3,170,624	-		BT2536	0.74	-0.6
3,170,664	+		BT2536	0.82	-0.3
3,170,694	+		BT2536	0.88	+0.5
3,170,706	-				-1.2
3,170,709	+				-1.9
3,170,710	-				+0.5
3,170,710	-				-1.9
3,170,710	-				-0.1
3,170,720	+				-1.6
3,170,721	-				+1.5
3,170,782	+				+0.3
3,170,782	+				-2.4
3,170,783	-				-1.9
3,170,843	+				-0.1
3,170,844	-				-1.6
3,170,844	-				-0.7
3,170,846	-				-3.3
3,170,847	+				+0.8
3,170,847	+				-2.5
3,170,848	-				-2.7
3,170,853	+				-3.0
3,170,858	-				-2.7
3,170,858	-				+0.4
3,170,945	-		BT2537	0.23	+0.1
3,170,981	+		BT2537	0.33	-0.5
3,170,981	+		BT2537	0.33	-1.6
3,171,044	+		BT2537	0.49	-2.1
3,171,044	+		BT2537	0.49	-0.6
3,171,045	-		BT2537	0.49	+0.9
3,171,047	+		BT2537	0.50	-0.1
3,171,057	+		BT2537	0.52	+0.2
3,171,058	-		BT2537	0.53	-2.1
3,171,217	-				-1.1
3,171,225	+				-2.9
3,171,244	+				-2.4
3,171,244	+				-3.2
3,171,244	+				-1.1
3,171,245	-				-1.1
3,171,245	-				-2.1
3,171,273	-				+1.9
3,171,361	+				+0.9
3,171,369	+				-1.4
3,171,369	+				-1.1
3,171,370	-				-1.5
3,171,375	+				-1.1
3,171,375	+				+0.9
3,171,380	+				-1.9
3,171,508	+				-2.6
3,171,512	+				-0.8
3,171,513	-				-2.2
3,171,587	+				-2.1
3,171,588	-				-2.4
3,171,591	+				-2.6
3,171,646	+		BT2538	0.14	-3.4
3,171,669	-		BT2538	0.19	-1.5
3,171,770	+		BT2538	0.40	-1.3
3,171,771	-		BT2538	0.40	-1.3
3,171,771	-		BT2538	0.40	-2.1
3,171,913	-		BT2538	0.69	-1.5
3,171,995	+		BT2538	0.86	-2.5
3,171,996	-		BT2538	0.86	+0.4
3,171,996	-		BT2538	0.86	-2.8
3,172,057	+				-1.7
3,172,137	+				-1.1
3,172,175	+				-2.4
3,172,292	+		BT2539	0.77	-3.1
3,172,292	+		BT2539	0.77	-1.6
3,172,293	-		BT2539	0.78	-0.3
3,172,360	-				-1.1
3,172,363	-				-2.4
3,172,433	+				-0.6
3,172,434	-				-0.1
3,172,468	+				-0.1
3,172,635	+				-0.1
3,172,638	-				-1.1
3,172,638	-				-0.1
3,172,638	-				-3.2
3,172,643	-				+0.9
3,172,648	+				+0.5
3,172,649	-				-2.4
3,172,649	-				-2.6
3,172,649	-				+1.5
3,172,660	+				-1.9
3,172,680	+		BT2540	0.11	+0.9
3,172,684	-		BT2540	0.11	-3.7
3,172,736	-		BT2540	0.16	-1.1
3,172,736	-		BT2540	0.16	-2.4
3,172,778	+		BT2540	0.19	-2.4
3,172,808	-		BT2540	0.22	-2.8
3,172,881	-		BT2540	0.28	+0.9
3,172,915	+		BT2540	0.31	-0.1
3,172,919	-		BT2540	0.31	+0.9
3,172,929	+		BT2540	0.32	-1.3
3,172,955	+		BT2540	0.34	-3.3
3,172,955	+		BT2540	0.34	-0.2
3,172,955	+		BT2540	0.34	+0.5
3,172,956	-		BT2540	0.34	-2.5
3,172,977	-		BT2540	0.36	+0.9