Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2197

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
2,760,021	+		BT2196	0.80	-0.1
2,760,051	+		BT2196	0.81	-1.4
2,760,051	+		BT2196	0.81	-0.5
2,760,067	+		BT2196	0.81	-1.0
2,760,068	-		BT2196	0.81	-2.4
2,760,068	-		BT2196	0.81	-1.2
2,760,105	-		BT2196	0.82	-0.1
2,760,105	-		BT2196	0.82	-2.2
2,760,186	+		BT2196	0.85	-2.1
2,760,209	+		BT2196	0.86	-0.3
2,760,220	+		BT2196	0.86	-0.1
2,760,283	-		BT2196	0.88	+0.9
2,760,359	-				-0.1
2,760,362	-				-1.7
2,760,370	-				-0.4
2,760,431	+				-1.9
2,760,432	-				-0.1
2,760,639	-				-1.3
2,760,654	+				-0.6
2,760,715	+				-1.4
2,760,723	+				-0.7
2,760,728	+				-1.7
2,760,758	+				-1.7
2,760,758	+				-0.7
2,760,765	-				+0.2
2,760,887	+				-0.4
2,760,894	-				-1.1
2,760,894	-				-2.4
2,760,894	-				+0.2
2,760,896	-				+1.5
2,760,919	+				-1.2
2,760,993	+		BT2197	0.11	-3.1
2,761,044	+		BT2197	0.16	-0.6
2,761,045	-		BT2197	0.16	-2.7
2,761,050	-		BT2197	0.17	-1.1
2,761,123	+		BT2197	0.24	-2.1
2,761,177	+		BT2197	0.30	-2.5
2,761,230	+		BT2197	0.35	-0.1
2,761,243	-		BT2197	0.37	-1.1
2,761,278	+		BT2197	0.40	-2.9
2,761,283	+		BT2197	0.41	-1.7
2,761,284	-		BT2197	0.41	-2.4
2,761,290	-		BT2197	0.41	-0.1
2,761,290	-		BT2197	0.41	-2.7
2,761,318	+		BT2197	0.44	-3.4
2,761,318	+		BT2197	0.44	-1.1
2,761,318	+		BT2197	0.44	-3.9
2,761,319	-		BT2197	0.44	-2.2
2,761,325	+		BT2197	0.45	+0.9
2,761,399	+				-1.1
2,761,470	+		BT2197	0.60	-2.1
2,761,554	+		BT2197	0.69	-2.6
2,761,554	+		BT2197	0.69	-1.7
2,761,605	+		BT2197	0.74	-2.9
2,761,606	-		BT2197	0.74	+0.5
2,761,734	+		BT2197	0.87	-0.8
2,761,832	+				+0.9
2,761,891	+				-1.9
2,761,897	+				-0.7
2,761,897	+				-2.3
2,761,958	+				+1.9
2,762,019	+				-0.1
2,762,040	-				-1.4
2,762,040	-				-2.4
2,762,043	+				+0.9
2,762,150	-				-0.1
2,762,150	-				-0.4
2,762,180	+				-1.7
2,762,180	+				-2.5
2,762,241	+				-0.4
2,762,241	+				-0.4
2,762,242	-				-0.4
2,762,262	+				-3.5
2,762,262	+				-0.9
2,762,263	-				-0.1
2,762,289	-				-0.9
2,762,516	+		BT2198	0.44	-1.1
2,762,531	+		BT2198	0.47	-2.3
2,762,546	+		BT2198	0.49	+1.4
2,762,547	-		BT2198	0.49	-2.1
2,762,574	+		BT2198	0.54	-1.7
2,762,574	+		BT2198	0.54	+0.5
2,762,579	+		BT2198	0.55	-0.1
2,762,665	-		BT2198	0.70	+0.9
2,762,704	-		BT2198	0.76	-3.1
2,762,706	+		BT2198	0.77	-0.5
2,762,706	+		BT2198	0.77	+1.1
2,762,737	+		BT2198	0.82	+0.3
2,762,738	-		BT2198	0.82	+0.5
2,762,770	+		BT2198	0.88	-0.1
2,762,771	-		BT2198	0.88	-0.1
2,762,841	-				-2.4
2,762,852	+				-2.4