Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1407

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
1,733,956	+		BT1405	0.44	+0.1
1,733,957	-		BT1405	0.44	-0.5
1,733,993	+		BT1405	0.50	+0.1
1,733,993	+		BT1405	0.50	+0.1
1,734,006	+		BT1405	0.51	+0.1
1,734,012	+		BT1405	0.52	-1.7
1,734,033	+		BT1405	0.56	-2.6
1,734,034	-		BT1405	0.56	+0.1
1,734,072	+		BT1405	0.61	-0.9
1,734,073	-		BT1405	0.61	-3.3
1,734,121	+		BT1405	0.69	-2.5
1,734,259	+		BT1405	0.89	+0.1
1,734,260	-		BT1405	0.89	-0.9
1,734,329	+				+0.1
1,734,340	+				+0.1
1,734,379	+				+0.1
1,734,380	-				-2.3
1,734,402	-		BT1406	0.10	-1.5
1,734,479	+		BT1406	0.22	+0.5
1,734,481	+		BT1406	0.23	-0.5
1,734,488	+		BT1406	0.24	-0.9
1,734,490	+		BT1406	0.24	-0.9
1,734,495	+		BT1406	0.25	-0.9
1,734,496	-		BT1406	0.25	+0.1
1,734,572	-		BT1406	0.37	-0.3
1,734,682	+		BT1406	0.55	+0.1
1,734,682	+		BT1406	0.55	-2.4
1,734,738	+		BT1406	0.64	-0.9
1,734,740	+		BT1406	0.64	+1.1
1,734,768	+		BT1406	0.69	-2.2
1,734,774	-		BT1406	0.70	-0.9
1,734,897	-		BT1406	0.89	-3.0
1,734,900	+				+0.1
1,734,900	+				-2.7
1,734,944	+				+1.1
1,735,005	+				-0.9
1,735,015	+				-1.5
1,735,016	-				-0.9
1,735,039	-				-3.5
1,735,113	+				+1.1
1,735,242	+				-2.3
1,735,243	-				-2.7
1,735,266	+				-3.1
1,735,297	-				-0.9
1,735,297	-				-0.5
1,735,462	+		BT1407	0.12	-0.2
1,735,554	+		BT1407	0.14	-2.6
1,735,558	+		BT1407	0.14	+1.6
1,735,558	+		BT1407	0.14	+0.1
1,735,567	-		BT1407	0.15	-1.4
1,735,570	+		BT1407	0.15	-1.5
1,735,570	+		BT1407	0.15	-1.6
1,735,662	-		BT1407	0.17	-1.9
1,735,745	+		BT1407	0.19	+0.1
1,735,813	-		BT1407	0.20	+1.1
1,735,859	+		BT1407	0.22	-1.7
1,736,064	+		BT1407	0.26	-2.6
1,736,143	-		BT1407	0.28	+0.1
1,736,174	+		BT1407	0.29	+0.1
1,736,213	-		BT1407	0.30	+0.7
1,736,213	-		BT1407	0.30	-2.3
1,736,419	-		BT1407	0.35	-3.1
1,736,470	-		BT1407	0.36	-3.3
1,736,509	+		BT1407	0.37	-1.7
1,736,510	-		BT1407	0.37	-0.8
1,736,511	+		BT1407	0.37	+1.1
1,736,662	+		BT1407	0.41	+2.1
1,736,676	-		BT1407	0.41	+0.1
1,736,691	+		BT1407	0.41	+0.1
1,736,838	+		BT1407	0.45	-2.3
1,736,838	+		BT1407	0.45	-1.5
1,736,895	+		BT1407	0.46	-1.9
1,736,896	-		BT1407	0.46	+0.1
1,736,897	+		BT1407	0.46	-1.6
1,736,988	+				+1.4
1,736,989	-		BT1407	0.48	-0.9
1,736,992	+		BT1407	0.48	-1.5
1,736,992	+		BT1407	0.48	-2.6
1,737,015	+		BT1407	0.49	-2.9
1,737,088	+		BT1407	0.51	-2.0
1,737,360	-		BT1407	0.57	-2.9
1,737,362	-		BT1407	0.57	+1.6
1,737,410	-		BT1407	0.58	-0.9
1,737,440	-		BT1407	0.59	-0.9
1,737,581	-		BT1407	0.62	+0.1
1,737,648	+		BT1407	0.64	-1.9
1,737,649	-		BT1407	0.64	-0.2
1,737,777	-		BT1407	0.67	-2.7
1,737,790	-		BT1407	0.67	-2.3
1,737,876	+		BT1407	0.69	+1.1
1,737,910	-		BT1407	0.70	+0.1
1,737,945	+		BT1407	0.71	-1.7
1,737,946	-		BT1407	0.71	-0.9
1,738,036	+		BT1407	0.73	-2.2
1,738,128	+		BT1407	0.75	-0.9
1,738,251	+		BT1407	0.78	+0.1
1,738,284	-		BT1407	0.79	+0.6
1,738,294	-		BT1407	0.79	-0.9
1,738,350	+		BT1407	0.81	-1.9
1,738,423	+		BT1407	0.82	-1.9
1,738,456	+		BT1407	0.83	+1.1
1,738,555	-		BT1407	0.85	-2.1
1,738,624	-		BT1407	0.87	-2.5
1,738,637	-		BT1407	0.87	-2.7
1,738,698	+		BT1407	0.89	-2.3
1,738,698	+		BT1407	0.89	-2.3
1,738,699	-				-0.9
1,738,705	+		BT1407	0.89	-0.9
1,738,727	-		BT1407	0.89	-1.3
1,738,762	-				-0.3
1,738,879	+				+1.5
1,738,880	-				-0.9
1,738,901	+				+0.1
1,739,051	-				-0.9
1,739,106	+				+0.1
1,739,128	+				-1.5
1,739,128	+				-3.4
1,739,129	-				-0.9
1,739,129	-				-1.5
1,739,177	+				+0.1
1,739,178	-				+0.6
1,739,340	+				-2.5
1,739,341	-				-2.3
1,739,366	-				-2.3
1,739,368	-				+1.1
1,739,423	+				-0.9
1,739,529	+				-4.3
1,739,530	-				-0.9
1,739,533	+				+0.1
1,739,562	-				+0.1
1,739,562	-				-2.8
1,739,591	+				+0.1
1,739,613	+				-0.9
1,739,614	-				+0.3
1,739,684	+		BT1408	0.12	+0.4
1,739,772	+		BT1408	0.15	-2.3
1,739,909	-		BT1408	0.19	+0.1
1,740,050	-		BT1408	0.23	-1.9
1,740,161	+		BT1408	0.26	+0.2