Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4540

Experiment: B-glucan from yeast; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	B-glucan from yeast; autoclaved 2.5 mg/ml (C)
5,960,277	-		BT4539	0.45	+0.5
5,960,282	-		BT4539	0.45	+1.6
5,960,282	-		BT4539	0.45	-0.2
5,960,300	-		BT4539	0.46	+0.5
5,960,307	+		BT4539	0.47	-0.1
5,960,358	-		BT4539	0.51	-0.5
5,960,364	-		BT4539	0.51	-0.5
5,960,421	+		BT4539	0.55	-0.6
5,960,455	+		BT4539	0.58	+0.4
5,960,510	+		BT4539	0.61	+1.3
5,960,520	+		BT4539	0.62	-2.1
5,960,643	+		BT4539	0.71	-0.1
5,960,643	+		BT4539	0.71	-0.1
5,960,643	+		BT4539	0.71	-0.1
5,960,644	-		BT4539	0.71	+0.1
5,960,644	-		BT4539	0.71	+0.7
5,960,802	-		BT4539	0.83	-0.1
5,960,805	-		BT4539	0.83	+0.3
5,960,814	-		BT4539	0.83	-0.3
5,960,814	-		BT4539	0.83	-0.1
5,960,844	+		BT4539	0.86	-1.6
5,960,912	+				+2.3
5,960,919	+				-1.4
5,960,955	-				-2.4
5,960,955	-				+0.5
5,960,961	+				-0.1
5,960,961	+				-0.1
5,960,962	-				+2.5
5,960,966	-				-1.1
5,960,993	+				-0.1
5,961,061	+				-0.1
5,961,064	+				+0.3
5,961,064	+				-2.5
5,961,070	+				+1.9
5,961,071	-				+0.4
5,961,071	-				+0.6
5,961,161	-				+0.9
5,961,217	-		BT4540	0.13	+2.9
5,961,288	+		BT4540	0.18	+0.2
5,961,290	-		BT4540	0.19	+1.5
5,961,327	-		BT4540	0.22	+0.7
5,961,331	-		BT4540	0.22	+0.1
5,961,352	+		BT4540	0.23	+0.8
5,961,352	+		BT4540	0.23	+0.4
5,961,353	-		BT4540	0.24	-0.1
5,961,366	+		BT4540	0.25	-0.1
5,961,366	+		BT4540	0.25	+0.8
5,961,396	+		BT4540	0.27	-0.1
5,961,406	-		BT4540	0.28	+0.2
5,961,442	+		BT4540	0.30	-0.1
5,961,443	-		BT4540	0.31	+0.9
5,961,503	+		BT4540	0.35	-0.8
5,961,503	-		BT4540	0.35	+0.6
5,961,518	+		BT4540	0.36	+1.2
5,961,721	-		BT4540	0.52	-1.1
5,961,753	+		BT4540	0.55	-0.1
5,961,786	+		BT4540	0.57	-2.4
5,961,790	-		BT4540	0.57	-1.6
5,961,832	-		BT4540	0.61	-1.4
5,961,833	+		BT4540	0.61	-0.1
5,961,833	+		BT4540	0.61	-2.5
5,961,869	-		BT4540	0.64	-1.6
5,961,919	+		BT4540	0.68	-1.4
5,961,931	-		BT4540	0.68	-0.1
5,961,949	+		BT4540	0.70	-0.8
5,961,950	-		BT4540	0.70	+0.5
5,961,953	+		BT4540	0.70	-2.0
5,961,954	-		BT4540	0.70	-3.1
5,962,024	+		BT4540	0.76	+0.9
5,962,025	-		BT4540	0.76	+0.9
5,962,026	+		BT4540	0.76	-1.7
5,962,035	+		BT4540	0.77	-1.1
5,962,046	+		BT4540	0.77	-0.1
5,962,076	+		BT4540	0.80	-1.6
5,962,077	-		BT4540	0.80	-0.1
5,962,088	+		BT4540	0.81	-0.1
5,962,118	+		BT4540	0.83	-1.1
5,962,122	+		BT4540	0.83	-0.6
5,962,122	+		BT4540	0.83	-0.5
5,962,123	-		BT4540	0.83	-0.6
5,962,194	+		BT4540	0.89	-0.1
5,962,195	-		BT4540	0.89	-0.1
5,962,201	-		BT4540	0.89	-3.4
5,962,226	-				-0.1
5,962,226	-				-2.4
5,962,231	-				-1.5
5,962,244	-				-0.1
5,962,244	-				-0.1
5,962,245	+				-1.6
5,962,268	-				-0.1
5,962,311	-				-0.6
5,962,330	+				-2.4
5,962,332	+				-0.1
5,962,418	+		BT4541	0.15	+0.9
5,962,419	-		BT4541	0.15	-0.1
5,962,440	+		BT4541	0.18	+0.4
5,962,468	-		BT4541	0.23	+0.3
5,962,469	+		BT4541	0.23	-2.4
5,962,475	+		BT4541	0.24	-1.6
5,962,476	-		BT4541	0.24	+0.4
5,962,525	-		BT4541	0.33	-0.1
5,962,526	+		BT4541	0.33	+0.0
5,962,556	-		BT4541	0.38	+0.9
5,962,559	-		BT4541	0.38	+0.6
5,962,564	+		BT4541	0.39	+0.5
5,962,587	+		BT4541	0.43	-0.3
5,962,588	-		BT4541	0.43	+0.4
5,962,598	+		BT4541	0.45	-0.1
5,962,598	+		BT4541	0.45	-1.6
5,962,601	+		BT4541	0.45	-0.1
5,962,609	-		BT4541	0.46	+3.7
5,962,623	-		BT4541	0.49	+1.1
5,962,623	-		BT4541	0.49	+0.9
5,962,688	+		BT4541	0.60	+1.3
5,962,892	+				-1.6
5,962,892	+				-0.1
5,962,899	-				+0.3
5,962,946	-		BT4542	0.15	-2.2
5,962,956	+		BT4542	0.17	-0.4
5,962,964	-		BT4542	0.18	-1.1
5,962,966	-		BT4542	0.18	-1.2
5,962,995	+		BT4542	0.24	-0.6
5,963,004	-		BT4542	0.25	-0.7
5,963,068	+		BT4542	0.37	-1.5
5,963,069	-		BT4542	0.37	-0.8
5,963,103	+		BT4542	0.43	-2.2
5,963,119	+		BT4542	0.46	-0.1
5,963,123	+		BT4542	0.47	+0.2
5,963,167	-		BT4542	0.55	-1.6
5,963,167	-		BT4542	0.55	-0.1
5,963,178	+		BT4542	0.57	+1.3
5,963,207	-		BT4542	0.62	-2.5
5,963,216	-		BT4542	0.63	-0.6
5,963,251	+		BT4542	0.70	-1.3
5,963,264	+		BT4542	0.72	+0.7
5,963,265	-		BT4542	0.72	-1.4
5,963,313	-		BT4542	0.81	-1.6
5,963,333	+		BT4542	0.85	+0.5