Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06615

Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
1,389,383	+				-3.1
1,389,391	-				-0.4
1,389,449	+				+0.1
1,389,521	-				-0.1
1,389,522	+				-0.0
1,389,537	+				-1.5
1,389,583	-		BWI76_RS06610	0.14	+0.8
1,389,661	+		BWI76_RS06610	0.25	-2.2
1,389,669	-		BWI76_RS06610	0.26	-0.1
1,389,674	-		BWI76_RS06610	0.27	+0.0
1,389,692	-		BWI76_RS06610	0.29	-0.3
1,389,728	-		BWI76_RS06610	0.34	+0.5
1,389,750	-		BWI76_RS06610	0.37	+0.3
1,389,783	-		BWI76_RS06610	0.41	-0.4
1,389,802	+		BWI76_RS06610	0.44	-0.8
1,389,806	+		BWI76_RS06610	0.45	+0.4
1,389,806	+		BWI76_RS06610	0.45	-1.3
1,389,810	-		BWI76_RS06610	0.45	-0.0
1,389,810	-		BWI76_RS06610	0.45	-0.9
1,389,831	-		BWI76_RS06610	0.48	-0.7
1,389,837	+		BWI76_RS06610	0.49	+0.5
1,389,845	-		BWI76_RS06610	0.50	+0.5
1,389,845	-		BWI76_RS06610	0.50	+0.0
1,389,869	-		BWI76_RS06610	0.53	+0.3
1,389,869	-		BWI76_RS06610	0.53	-0.2
1,389,869	-		BWI76_RS06610	0.53	+0.5
1,389,869	-		BWI76_RS06610	0.53	-0.3
1,389,869	-		BWI76_RS06610	0.53	-0.5
1,389,871	+		BWI76_RS06610	0.53	-0.4
1,389,871	+		BWI76_RS06610	0.53	+0.3
1,389,871	+		BWI76_RS06610	0.53	+1.4
1,389,879	-		BWI76_RS06610	0.54	+0.0
1,389,879	-		BWI76_RS06610	0.54	+3.2
1,389,879	-		BWI76_RS06610	0.54	+1.2
1,389,897	+		BWI76_RS06610	0.57	+0.5
1,389,897	+		BWI76_RS06610	0.57	+0.2
1,390,028	+		BWI76_RS06610	0.74	-0.3
1,390,028	-		BWI76_RS06610	0.74	-0.8
1,390,038	-		BWI76_RS06610	0.76	-1.4
1,390,038	-		BWI76_RS06610	0.76	-0.8
1,390,044	+		BWI76_RS06610	0.77	-0.8
1,390,044	+		BWI76_RS06610	0.77	-0.3
1,390,044	+		BWI76_RS06610	0.77	+0.4
1,390,044	+		BWI76_RS06610	0.77	-0.6
1,390,044	+		BWI76_RS06610	0.77	-0.7
1,390,044	+		BWI76_RS06610	0.77	-1.0
1,390,044	+		BWI76_RS06610	0.77	-0.4
1,390,044	+		BWI76_RS06610	0.77	+1.3
1,390,044	+		BWI76_RS06610	0.77	+1.4
1,390,044	+		BWI76_RS06610	0.77	+1.5
1,390,044	+		BWI76_RS06610	0.77	-0.6
1,390,044	+		BWI76_RS06610	0.77	-0.5
1,390,044	+				+3.2
1,390,044	+		BWI76_RS06610	0.77	-1.0
1,390,044	+		BWI76_RS06610	0.77	-0.3
1,390,044	+		BWI76_RS06610	0.77	-1.1
1,390,044	+		BWI76_RS06610	0.77	-0.0
1,390,044	+		BWI76_RS06610	0.77	+0.3
1,390,044	+		BWI76_RS06610	0.77	-0.4
1,390,044	+		BWI76_RS06610	0.77	-1.0
1,390,044	+		BWI76_RS06610	0.77	+2.0
1,390,044	+		BWI76_RS06610	0.77	+0.0
1,390,044	+		BWI76_RS06610	0.77	-0.5
1,390,044	+				+4.0
1,390,044	+		BWI76_RS06610	0.77	+0.8
1,390,044	+		BWI76_RS06610	0.77	+0.7
1,390,044	+		BWI76_RS06610	0.77	+1.1
1,390,044	+		BWI76_RS06610	0.77	-0.8
1,390,052	-		BWI76_RS06610	0.78	-0.2
1,390,052	-		BWI76_RS06610	0.78	-0.7
1,390,052	-		BWI76_RS06610	0.78	+0.6
1,390,052	-		BWI76_RS06610	0.78	-2.6
1,390,052	-		BWI76_RS06610	0.78	-0.1
1,390,052	-		BWI76_RS06610	0.78	+1.5
1,390,052	-		BWI76_RS06610	0.78	+0.7
1,390,052	-		BWI76_RS06610	0.78	-1.2
1,390,052	-		BWI76_RS06610	0.78	+2.0
1,390,052	-		BWI76_RS06610	0.78	-1.1
1,390,052	-		BWI76_RS06610	0.78	-0.1
1,390,052	-		BWI76_RS06610	0.78	-0.3
1,390,052	-		BWI76_RS06610	0.78	-0.4
1,390,052	-		BWI76_RS06610	0.78	+0.1
1,390,052	-		BWI76_RS06610	0.78	+1.1
1,390,052	-		BWI76_RS06610	0.78	+2.0
1,390,052	-		BWI76_RS06610	0.78	+1.2
1,390,052	-		BWI76_RS06610	0.78	-0.7
1,390,052	-		BWI76_RS06610	0.78	-0.2
1,390,052	-		BWI76_RS06610	0.78	+0.6
1,390,052	-		BWI76_RS06610	0.78	-0.1
1,390,052	-		BWI76_RS06610	0.78	-0.5
1,390,052	-		BWI76_RS06610	0.78	+0.1
1,390,052	-		BWI76_RS06610	0.78	-0.1
1,390,052	-				-0.3
1,390,052	-		BWI76_RS06610	0.78	-0.6
1,390,052	-		BWI76_RS06610	0.78	-0.0
1,390,052	-		BWI76_RS06610	0.78	-1.3
1,390,052	-		BWI76_RS06610	0.78	+0.7
1,390,052	-		BWI76_RS06610	0.78	+0.0
1,390,052	-		BWI76_RS06610	0.78	-1.9
1,390,052	-		BWI76_RS06610	0.78	+0.5
1,390,052	-		BWI76_RS06610	0.78	-0.2
1,390,075	+		BWI76_RS06610	0.81	+0.3
1,390,083	-		BWI76_RS06610	0.82	-0.1
1,390,095	-		BWI76_RS06610	0.84	+1.4
1,390,097	-		BWI76_RS06610	0.84	+0.5
1,390,099	-		BWI76_RS06610	0.84	+1.4
1,390,110	+		BWI76_RS06610	0.86	+1.5
1,390,110	+				+0.2
1,390,110	+		BWI76_RS06610	0.86	-0.3
1,390,110	-		BWI76_RS06610	0.86	+1.2
1,390,118	-		BWI76_RS06610	0.87	+0.3
1,390,118	-		BWI76_RS06610	0.87	-1.4
1,390,118	-		BWI76_RS06610	0.87	-0.1
1,390,118	-		BWI76_RS06610	0.87	-2.9
1,390,125	+		BWI76_RS06610	0.88	+0.6
1,390,183	+				-0.3
1,390,183	+				-0.8
1,390,183	+				-1.1
1,390,183	+				+0.8
1,390,183	+				-0.0
1,390,183	+				-0.0
1,390,191	-				+0.8
1,390,191	-				+0.1
1,390,276	-				-0.4
1,390,281	+				-0.0
1,390,289	-				-0.7
1,390,300	+				-1.0
1,390,306	-				+0.2
1,390,392	+				+0.4
1,390,413	-				-0.0
1,390,426	-				-1.1
1,390,436	-				-0.3
1,390,453	+				+1.4
1,390,461	-				+1.1
1,390,461	-				-0.6
1,390,502	+		BWI76_RS06615	0.12	+0.3
1,390,507	-		BWI76_RS06615	0.12	+3.3
1,390,510	-		BWI76_RS06615	0.12	+0.5
1,390,542	-		BWI76_RS06615	0.15	-0.3
1,390,605	-		BWI76_RS06615	0.19	+0.2
1,390,663	+		BWI76_RS06615	0.23	+6.1
1,390,729	+		BWI76_RS06615	0.27	-1.0
1,390,855	+		BWI76_RS06615	0.36	+0.1
1,390,881	+				+1.4
1,390,964	+		BWI76_RS06615	0.43	-0.2
1,390,977	-		BWI76_RS06615	0.44	+0.4
1,390,981	+		BWI76_RS06615	0.44	-0.2
1,391,005	-		BWI76_RS06615	0.46	+1.0
1,391,024	-		BWI76_RS06615	0.47	-1.1
1,391,075	-		BWI76_RS06615	0.51	-1.0
1,391,150	+		BWI76_RS06615	0.56	+0.3
1,391,229	+		BWI76_RS06615	0.61	+0.6
1,391,237	-		BWI76_RS06615	0.61	+0.4
1,391,243	-		BWI76_RS06615	0.62	+0.7
1,391,342	-		BWI76_RS06615	0.68	+1.6
1,391,348	-		BWI76_RS06615	0.69	+0.7
1,391,387	-		BWI76_RS06615	0.72	+0.1
1,391,387	-		BWI76_RS06615	0.72	-0.2
1,391,387	-		BWI76_RS06615	0.72	+0.1
1,391,546	-				+2.0
1,391,548	+		BWI76_RS06615	0.82	+1.4
1,391,581	-		BWI76_RS06615	0.85	+1.2
1,391,630	+		BWI76_RS06615	0.88	-0.6
1,391,639	+		BWI76_RS06615	0.88	+1.0
1,391,659	-		BWI76_RS06615	0.90	-1.4
1,391,664	-				-0.0
1,391,669	-				+0.1
1,391,684	-				+0.7
1,391,692	-				+0.1
1,391,692	-				+0.6
1,391,692	-				+2.2
1,391,708	+				+0.7
1,391,716	-				+0.4
1,391,727	+				+1.3
1,391,727	+				+1.2
1,391,730	-				+0.4
1,391,735	-				+1.3
1,391,735	-				-0.6
1,391,753	+				+0.4
1,391,753	+				+4.6
1,391,753	+				+1.3
1,391,753	+				+0.6
1,391,753	+				+0.1
1,391,753	+				+0.2
1,391,761	-				-1.3
1,391,761	-				-0.6
1,391,761	-				+0.3
1,391,761	-				-0.7
1,391,761	-				+0.2
1,391,777	-				-1.7
1,391,788	+				-0.6
1,391,806	+				+0.3
1,391,842	+				-1.2
1,391,849	+				-1.7
1,391,857	-				-0.6
1,391,857	-				-1.1
1,391,857	-				+0.8
1,391,966	+				+0.9
1,392,002	+				+0.4
1,392,002	+				+0.1
1,392,038	-				-1.2
1,392,043	+				+0.4
1,392,043	+				-0.7
1,392,043	+				+1.7
1,392,043	+				+0.2
1,392,043	+				-1.3
1,392,043	+				+0.1
1,392,043	+				+0.5
1,392,043	+				-0.1
1,392,043	+				-2.0
1,392,044	+				-1.3
1,392,050	+				-0.2
1,392,050	+				+0.5
1,392,050	+				+1.1
1,392,050	+				+0.4
1,392,050	+				-1.0
1,392,050	+				-0.4
1,392,050	+				-1.1
1,392,050	+				-0.5
1,392,050	+				+0.9
1,392,050	+				-0.3
1,392,050	+				-0.2
1,392,050	+				+0.9
1,392,050	+				+0.4
1,392,050	+				-1.4
1,392,050	+				-0.9
1,392,050	+				+0.7
1,392,050	+				+1.4
1,392,050	+				+1.3
1,392,050	+				-0.3
1,392,050	+				+1.2
1,392,050	+				+0.1
1,392,050	+				-0.2
1,392,050	+				+0.3
1,392,050	+				-0.8
1,392,050	+				-0.6
1,392,050	+				+0.1
1,392,050	+				-0.4
1,392,050	+				-0.5
1,392,051	+				-0.6
1,392,051	-				+0.7
1,392,051	-				-0.3
1,392,051	-				-0.6
1,392,051	-				-0.5
1,392,051	-				+0.0
1,392,056	+				-0.9
1,392,056	+				-0.7
1,392,056	+				-0.1
1,392,056	+				-1.0
1,392,056	+				+0.2
1,392,056	+				-0.5
1,392,058	-				-0.1
1,392,058	-				-2.9
1,392,058	-				+0.2
1,392,058	-				+1.4
1,392,058	-				-1.2
1,392,058	-				+0.2
1,392,058	-				-0.3
1,392,058	-				+1.8
1,392,058	-				-1.1
1,392,058	-				+0.3
1,392,058	-				-1.0
1,392,058	-				+0.9
1,392,058	-				-1.2
1,392,058	-				+0.2
1,392,058	-				-0.5
1,392,058	-				+0.1
1,392,058	-				+0.0
1,392,058	-				+0.4
1,392,058	-				+4.6
1,392,058	-				+1.1
1,392,058	-				+0.0
1,392,058	-				-0.2
1,392,058	-				-1.3
1,392,058	-				-1.6
1,392,058	-				-0.2
1,392,058	-				+0.7
1,392,058	-				+6.4
1,392,058	-				+0.3
1,392,058	-				+0.6
1,392,058	-				+0.3
1,392,058	-				+1.4
1,392,058	-				+1.1
1,392,058	-				+0.1
1,392,058	-				-0.0
1,392,058	-				-1.3
1,392,058	-				+1.6
1,392,058	-				-1.6
1,392,058	-				+0.6
1,392,058	-				+0.4
1,392,058	-				+1.0
1,392,059	-				-0.6
1,392,059	-				+1.0
1,392,059	-				+0.6
1,392,064	-				-0.0
1,392,064	-				-0.0
1,392,064	-				+0.3
1,392,064	-				+0.9
1,392,064	-				+0.2
1,392,064	-				-0.6
1,392,064	-				-0.2
1,392,064	-				+0.2
1,392,110	+		BWI76_RS06620	0.14	+0.4
1,392,110	+		BWI76_RS06620	0.14	+0.1
1,392,112	-		BWI76_RS06620	0.14	-2.6
1,392,135	+		BWI76_RS06620	0.16	-0.5
1,392,135	+		BWI76_RS06620	0.16	-1.1
1,392,135	+		BWI76_RS06620	0.16	+0.2
1,392,135	+		BWI76_RS06620	0.16	-0.8
1,392,135	+		BWI76_RS06620	0.16	-1.7
1,392,140	+		BWI76_RS06620	0.17	+0.4
1,392,140	+		BWI76_RS06620	0.17	-0.3
1,392,143	-		BWI76_RS06620	0.17	+0.1
1,392,143	-		BWI76_RS06620	0.17	-0.0
1,392,148	-		BWI76_RS06620	0.18	-1.5
1,392,160	-		BWI76_RS06620	0.19	+0.6
1,392,203	+		BWI76_RS06620	0.24	+0.7
1,392,213	-		BWI76_RS06620	0.25	+1.6
1,392,220	+		BWI76_RS06620	0.25	-1.7
1,392,238	-		BWI76_RS06620	0.27	+1.9
1,392,243	+		BWI76_RS06620	0.28	-1.7
1,392,243	+		BWI76_RS06620	0.28	+1.0
1,392,243	+		BWI76_RS06620	0.28	-0.2
1,392,243	+		BWI76_RS06620	0.28	-0.9
1,392,243	+		BWI76_RS06620	0.28	-1.3
1,392,245	+		BWI76_RS06620	0.28	-1.3
1,392,251	-		BWI76_RS06620	0.29	+1.0
1,392,253	+		BWI76_RS06620	0.29	+0.4
1,392,255	+		BWI76_RS06620	0.29	-0.8
1,392,255	+		BWI76_RS06620	0.29	-3.7
1,392,269	+		BWI76_RS06620	0.31	-0.5
1,392,269	+		BWI76_RS06620	0.31	+0.6
1,392,269	+		BWI76_RS06620	0.31	+1.4
1,392,269	+		BWI76_RS06620	0.31	-1.0
1,392,277	-		BWI76_RS06620	0.32	-2.2
1,392,412	+		BWI76_RS06620	0.46	-0.6
1,392,423	+		BWI76_RS06620	0.47	+0.1
1,392,500	+		BWI76_RS06620	0.55	+0.8
1,392,500	+				+0.6
1,392,500	+		BWI76_RS06620	0.55	-0.6
1,392,500	+		BWI76_RS06620	0.55	-0.6
1,392,500	+		BWI76_RS06620	0.55	-1.6
1,392,500	+		BWI76_RS06620	0.55	+0.1
1,392,500	+		BWI76_RS06620	0.55	+0.4
1,392,500	+		BWI76_RS06620	0.55	+2.3
1,392,500	+		BWI76_RS06620	0.55	-2.3
1,392,500	+		BWI76_RS06620	0.55	+1.0
1,392,500	+		BWI76_RS06620	0.55	-1.8
1,392,500	+		BWI76_RS06620	0.55	+0.4
1,392,500	+		BWI76_RS06620	0.55	-0.1
1,392,500	+		BWI76_RS06620	0.55	-0.1
1,392,500	+		BWI76_RS06620	0.55	-0.5
1,392,500	+		BWI76_RS06620	0.55	+1.3
1,392,500	+		BWI76_RS06620	0.55	-1.0
1,392,500	+		BWI76_RS06620	0.55	-0.3
1,392,500	+		BWI76_RS06620	0.55	+0.6
1,392,500	+		BWI76_RS06620	0.55	+0.0
1,392,500	+		BWI76_RS06620	0.55	+0.2
1,392,500	+		BWI76_RS06620	0.55	-0.0
1,392,500	+		BWI76_RS06620	0.55	+2.1
1,392,500	+		BWI76_RS06620	0.55	+0.5
1,392,500	+		BWI76_RS06620	0.55	+1.7
1,392,500	+		BWI76_RS06620	0.55	+0.9
1,392,500	+		BWI76_RS06620	0.55	-0.2
1,392,500	+		BWI76_RS06620	0.55	-1.1
1,392,500	+		BWI76_RS06620	0.55	-0.2
1,392,500	+		BWI76_RS06620	0.55	+1.7
1,392,500	+		BWI76_RS06620	0.55	-0.7
1,392,508	+		BWI76_RS06620	0.56	-0.1
1,392,508	-				-1.1
1,392,508	-		BWI76_RS06620	0.56	-0.4
1,392,508	-		BWI76_RS06620	0.56	-0.1
1,392,508	-		BWI76_RS06620	0.56	+0.8
1,392,508	-		BWI76_RS06620	0.56	-0.3
1,392,508	-		BWI76_RS06620	0.56	+3.1
1,392,508	-		BWI76_RS06620	0.56	+1.6
1,392,508	-		BWI76_RS06620	0.56	+0.1
1,392,508	-		BWI76_RS06620	0.56	-1.0
1,392,510	+		BWI76_RS06620	0.56	-0.4
1,392,510	+		BWI76_RS06620	0.56	+1.8
1,392,571	+		BWI76_RS06620	0.63	-0.2
1,392,573	+		BWI76_RS06620	0.63	-0.2
1,392,573	+		BWI76_RS06620	0.63	-0.2
1,392,581	+		BWI76_RS06620	0.64	-1.5
1,392,581	-		BWI76_RS06620	0.64	+0.2
1,392,581	-		BWI76_RS06620	0.64	+0.1
1,392,581	-		BWI76_RS06620	0.64	-0.7
1,392,586	+		BWI76_RS06620	0.64	-1.4
1,392,586	+		BWI76_RS06620	0.64	+2.2
1,392,586	+		BWI76_RS06620	0.64	-5.8
1,392,594	-		BWI76_RS06620	0.65	-0.2
1,392,594	-		BWI76_RS06620	0.65	+0.3
1,392,594	-		BWI76_RS06620	0.65	-0.5
1,392,594	-		BWI76_RS06620	0.65	+0.3
1,392,594	-		BWI76_RS06620	0.65	+1.2
1,392,594	-		BWI76_RS06620	0.65	+4.5
1,392,611	+		BWI76_RS06620	0.67	-0.0
1,392,619	-		BWI76_RS06620	0.68	+0.7
1,392,621	+		BWI76_RS06620	0.68	-0.6
1,392,626	+		BWI76_RS06620	0.69	+2.0
1,392,626	+		BWI76_RS06620	0.69	+0.3
1,392,634	-		BWI76_RS06620	0.69	+2.2
1,392,671	+		BWI76_RS06620	0.73	+1.6
1,392,690	+		BWI76_RS06620	0.75	+0.1
1,392,698	+		BWI76_RS06620	0.76	+0.7
1,392,706	-		BWI76_RS06620	0.77	-1.1
1,392,737	+		BWI76_RS06620	0.80	-0.7
1,392,778	-		BWI76_RS06620	0.85	-0.9
1,392,785	+		BWI76_RS06620	0.85	-0.1
1,392,795	+		BWI76_RS06620	0.87	-0.1