Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23640

Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
4,931,542	-		BWI76_RS23635	0.73	+1.5
4,931,568	+		BWI76_RS23635	0.75	-0.1
4,931,568	+				-0.1
4,931,576	-		BWI76_RS23635	0.75	+0.7
4,931,576	-		BWI76_RS23635	0.75	+0.2
4,931,576	-		BWI76_RS23635	0.75	-0.1
4,931,598	-		BWI76_RS23635	0.77	+1.2
4,931,625	-		BWI76_RS23635	0.79	-0.7
4,931,684	+		BWI76_RS23635	0.82	+1.1
4,931,984	+				+0.5
4,931,984	+				+0.2
4,931,984	+				-0.3
4,931,992	-				+7.1
4,931,992	-				+1.9
4,932,031	-				+1.2
4,932,085	+				-0.4
4,932,093	-				-0.1
4,932,268	+				+1.1
4,932,268	+				+0.0
4,932,269	+				+0.6
4,932,269	+				-2.5
4,932,269	+				-0.9
4,932,269	+				-0.4
4,932,270	+				+0.4
4,932,276	-				+0.1
4,932,277	-				-0.5
4,932,288	-				+0.9
4,932,312	+				+0.9
4,932,357	+				-0.2
4,932,399	+				-1.9
4,932,445	-				+0.7
4,932,507	+				+3.3
4,932,508	-				-0.5
4,932,515	-				+1.3
4,932,536	+				+1.0
4,932,536	+				+0.7
4,932,542	-				+0.7
4,932,547	-				-0.5
4,932,606	-		BWI76_RS23640	0.12	-1.0
4,932,649	+		BWI76_RS23640	0.16	+0.7
4,932,674	-		BWI76_RS23640	0.19	+0.0
4,932,679	-		BWI76_RS23640	0.19	+0.8
4,932,717	-		BWI76_RS23640	0.23	-0.1
4,932,717	-		BWI76_RS23640	0.23	+0.1
4,932,727	+		BWI76_RS23640	0.24	+0.0
4,932,740	-		BWI76_RS23640	0.25	-1.6
4,932,741	+		BWI76_RS23640	0.25	-0.1
4,932,741	-		BWI76_RS23640	0.25	-2.4
4,932,749	-		BWI76_RS23640	0.26	-0.8
4,932,749	-		BWI76_RS23640	0.26	-0.8
4,932,751	+		BWI76_RS23640	0.26	+5.2
4,932,751	+		BWI76_RS23640	0.26	+0.1
4,932,751	+		BWI76_RS23640	0.26	+0.8
4,932,805	+		BWI76_RS23640	0.31	-1.9
4,932,805	+		BWI76_RS23640	0.31	-0.3
4,932,813	-		BWI76_RS23640	0.32	+0.5
4,932,817	+		BWI76_RS23640	0.32	-0.2
4,932,825	-		BWI76_RS23640	0.33	+5.4
4,932,825	-		BWI76_RS23640	0.33	-1.3
4,932,825	-		BWI76_RS23640	0.33	+0.2
4,932,825	-		BWI76_RS23640	0.33	-1.1
4,932,825	-		BWI76_RS23640	0.33	+0.1
4,932,957	-		BWI76_RS23640	0.45	+0.9
4,932,957	-		BWI76_RS23640	0.45	+0.2
4,933,029	+		BWI76_RS23640	0.52	+0.4
4,933,037	-		BWI76_RS23640	0.53	+3.9
4,933,048	-		BWI76_RS23640	0.54	-0.5
4,933,089	+		BWI76_RS23640	0.57	-0.3
4,933,091	-		BWI76_RS23640	0.58	-1.4
4,933,100	+		BWI76_RS23640	0.58	-0.8
4,933,108	-		BWI76_RS23640	0.59	+0.5
4,933,108	-		BWI76_RS23640	0.59	+0.3
4,933,108	-		BWI76_RS23640	0.59	+0.3
4,933,131	+		BWI76_RS23640	0.61	-0.1
4,933,133	+		BWI76_RS23640	0.62	+0.4
4,933,133	+		BWI76_RS23640	0.62	-0.6
4,933,139	-		BWI76_RS23640	0.62	+1.9
4,933,211	+		BWI76_RS23640	0.69	-2.0
4,933,243	+		BWI76_RS23640	0.72	-0.0
4,933,265	+		BWI76_RS23640	0.74	+0.4
4,933,287	-		BWI76_RS23640	0.76	-0.2
4,933,320	+		BWI76_RS23640	0.79	+0.2
4,933,328	-		BWI76_RS23640	0.80	+0.0
4,933,328	-		BWI76_RS23640	0.80	-0.4
4,933,332	+		BWI76_RS23640	0.80	-0.1
4,933,339	+		BWI76_RS23640	0.81	-0.8
4,933,347	+		BWI76_RS23640	0.82	+0.8
4,933,362	+		BWI76_RS23640	0.83	+0.4
4,933,364	+				+2.3
4,933,364	+		BWI76_RS23640	0.83	+1.1
4,933,365	-		BWI76_RS23640	0.83	-0.2
4,933,369	+		BWI76_RS23640	0.84	-3.2
4,933,369	+				-0.4
4,933,369	+		BWI76_RS23640	0.84	-0.7
4,933,369	+		BWI76_RS23640	0.84	-0.0
4,933,377	+		BWI76_RS23640	0.84	-1.5
4,933,377	+		BWI76_RS23640	0.84	-3.5
4,933,377	+		BWI76_RS23640	0.84	-0.0
4,933,377	-		BWI76_RS23640	0.84	-1.3
4,933,377	-		BWI76_RS23640	0.84	-0.8
4,933,385	-		BWI76_RS23640	0.85	-0.1
4,933,385	-		BWI76_RS23640	0.85	-0.8
4,933,385	-		BWI76_RS23640	0.85	+0.1
4,933,385	-		BWI76_RS23640	0.85	-1.9
4,933,385	-		BWI76_RS23640	0.85	+0.6
4,933,385	-		BWI76_RS23640	0.85	-0.7
4,933,390	-		BWI76_RS23640	0.86	+0.5
4,933,392	+		BWI76_RS23640	0.86	-1.1
4,933,422	+		BWI76_RS23640	0.89	+0.5
4,933,440	-				-0.5
4,933,447	-				-2.0
4,933,461	+				+0.0
4,933,462	+				-1.2
4,933,462	+				-0.9
4,933,468	-				+0.6
4,933,469	-				-0.0
4,933,470	-				-0.4
4,933,478	-				+0.7
4,933,480	+				-2.9
4,933,487	-				-1.1
4,933,488	-				-0.6
4,933,488	-				-0.6
4,933,492	-				-0.7
4,933,492	-				-0.1
4,933,502	-				-1.6
4,933,516	+				-1.9
4,933,516	+				-0.8
4,933,516	+				-1.2
4,933,516	+				+0.4
4,933,516	+				+0.4
4,933,516	+				-0.5
4,933,516	+				-0.9
4,933,524	-				+1.7
4,933,524	-				-0.4
4,933,524	-				-0.6
4,933,524	-				-0.2
4,933,524	-				-0.5
4,933,524	-				+2.3
4,933,524	-				-0.3
4,933,524	-				+0.3
4,933,524	-				+0.1
4,933,524	-				-1.1
4,933,524	-				-2.5
4,933,524	-				+0.2
4,933,524	-				+0.7
4,933,524	-				-0.1
4,933,524	-				+1.0
4,933,529	-				+0.3
4,933,534	-				+0.4
4,933,541	+				+0.2
4,933,549	+				+1.3
4,933,615	-				-0.3
4,933,647	+				+0.2
4,933,662	+				-2.1
4,933,783	+				+1.1
4,933,795	+				+0.9
4,933,795	+				-0.5
4,933,795	+				+0.4
4,933,795	+				+3.1
4,933,795	+				+0.1
4,933,795	+				-1.1
4,933,801	-				+0.1
4,933,803	-				-2.4
4,933,803	-				+0.3
4,933,803	-				-4.9
4,933,803	-				-0.7
4,933,803	-				-0.5
4,933,803	-				-2.2
4,933,803	-				-0.7
4,933,803	-				-1.2
4,933,840	+				-1.2
4,933,894	+				+0.8
4,933,894	+				+0.5
4,933,895	+				-1.3
4,933,895	+				-1.1
4,933,901	-				+2.6
4,933,902	-				-0.6
4,933,902	-				+0.7
4,933,902	-				-1.3
4,933,903	-				+2.5
4,933,903	-				+1.1
4,933,903	-				-0.2
4,933,911	+				-0.8
4,933,917	+				+0.5
4,933,927	-				+0.3
4,934,068	-				-4.3
4,934,083	-				-0.7
4,934,106	-				-0.4
4,934,113	-				-1.0
4,934,113	-				+0.1
4,934,113	-				-2.1
4,934,140	+		BWI76_RS23645	0.10	+1.9
4,934,148	-				-1.2
4,934,148	-		BWI76_RS23645	0.11	+0.1
4,934,148	-		BWI76_RS23645	0.11	+0.4
4,934,148	-		BWI76_RS23645	0.11	-0.9
4,934,148	-		BWI76_RS23645	0.11	+0.6
4,934,150	+		BWI76_RS23645	0.11	-2.0
4,934,150	+		BWI76_RS23645	0.11	+0.4
4,934,150	+		BWI76_RS23645	0.11	+3.7
4,934,150	+		BWI76_RS23645	0.11	-0.7
4,934,157	-		BWI76_RS23645	0.11	-1.3
4,934,157	-		BWI76_RS23645	0.11	-0.2
4,934,157	-				-0.3
4,934,158	-		BWI76_RS23645	0.11	+0.1
4,934,158	-		BWI76_RS23645	0.11	-0.1
4,934,158	-		BWI76_RS23645	0.11	-2.3
4,934,158	-		BWI76_RS23645	0.11	-0.2
4,934,158	-		BWI76_RS23645	0.11	+0.3
4,934,158	-		BWI76_RS23645	0.11	+7.6
4,934,158	-		BWI76_RS23645	0.11	+0.4
4,934,158	-		BWI76_RS23645	0.11	-0.6
4,934,221	+		BWI76_RS23645	0.16	-0.3
4,934,228	+		BWI76_RS23645	0.16	-0.4
4,934,228	+		BWI76_RS23645	0.16	-0.3
4,934,228	+		BWI76_RS23645	0.16	-2.4
4,934,228	+		BWI76_RS23645	0.16	+1.4
4,934,236	-		BWI76_RS23645	0.17	-0.1
4,934,259	+		BWI76_RS23645	0.18	-0.4
4,934,266	+		BWI76_RS23645	0.19	-1.3
4,934,266	+		BWI76_RS23645	0.19	-0.7
4,934,266	+		BWI76_RS23645	0.19	-2.5
4,934,266	+		BWI76_RS23645	0.19	+0.9
4,934,266	-		BWI76_RS23645	0.19	+5.7
4,934,268	+		BWI76_RS23645	0.19	-1.3
4,934,268	+		BWI76_RS23645	0.19	-0.5
4,934,268	+		BWI76_RS23645	0.19	-0.3
4,934,268	+		BWI76_RS23645	0.19	+0.5
4,934,268	+		BWI76_RS23645	0.19	-0.8
4,934,268	+		BWI76_RS23645	0.19	+1.0
4,934,273	+		BWI76_RS23645	0.19	+0.6
4,934,273	+		BWI76_RS23645	0.19	+0.9
4,934,274	-		BWI76_RS23645	0.19	-0.4
4,934,274	-		BWI76_RS23645	0.19	-0.7
4,934,276	-		BWI76_RS23645	0.20	+0.1
4,934,276	-				+0.3
4,934,276	-		BWI76_RS23645	0.20	+0.2
4,934,281	-		BWI76_RS23645	0.20	+1.2
4,934,281	-				-0.2
4,934,282	+		BWI76_RS23645	0.20	-0.3
4,934,282	+		BWI76_RS23645	0.20	-2.1
4,934,290	+		BWI76_RS23645	0.21	+0.4
4,934,292	+		BWI76_RS23645	0.21	-0.8
4,934,296	+		BWI76_RS23645	0.21	+2.0
4,934,298	+		BWI76_RS23645	0.21	+0.8
4,934,302	+		BWI76_RS23645	0.21	-0.8
4,934,305	+		BWI76_RS23645	0.22	+0.9
4,934,308	+		BWI76_RS23645	0.22	+0.2
4,934,353	+		BWI76_RS23645	0.25	+0.0
4,934,353	+		BWI76_RS23645	0.25	+0.4
4,934,362	+		BWI76_RS23645	0.26	-2.2
4,934,383	+		BWI76_RS23645	0.27	-1.8
4,934,415	+		BWI76_RS23645	0.29	-0.3
4,934,415	-		BWI76_RS23645	0.29	-0.2
4,934,420	+		BWI76_RS23645	0.30	+0.7
4,934,434	+		BWI76_RS23645	0.31	-1.5
4,934,442	+		BWI76_RS23645	0.31	-0.8
4,934,442	+		BWI76_RS23645	0.31	-1.3
4,934,442	+		BWI76_RS23645	0.31	-1.6
4,934,442	+		BWI76_RS23645	0.31	-0.5
4,934,442	+		BWI76_RS23645	0.31	+0.9
4,934,442	+		BWI76_RS23645	0.31	-0.7
4,934,442	-		BWI76_RS23645	0.31	+0.5
4,934,442	-		BWI76_RS23645	0.31	-0.5
4,934,442	-		BWI76_RS23645	0.31	+0.1
4,934,442	-		BWI76_RS23645	0.31	+1.4
4,934,442	-				+0.9
4,934,448	+				+3.0
4,934,448	+		BWI76_RS23645	0.32	+0.4
4,934,448	+		BWI76_RS23645	0.32	-0.7
4,934,449	-		BWI76_RS23645	0.32	+0.9
4,934,450	+		BWI76_RS23645	0.32	+1.8
4,934,450	+		BWI76_RS23645	0.32	+0.3
4,934,450	+		BWI76_RS23645	0.32	-1.0
4,934,450	+		BWI76_RS23645	0.32	+0.1
4,934,450	+		BWI76_RS23645	0.32	-2.5
4,934,451	-		BWI76_RS23645	0.32	-2.4
4,934,451	-		BWI76_RS23645	0.32	-0.1
4,934,451	-		BWI76_RS23645	0.32	-0.7
4,934,451	-		BWI76_RS23645	0.32	+0.6
4,934,453	+		BWI76_RS23645	0.32	+1.8
4,934,453	+		BWI76_RS23645	0.32	-0.4
4,934,453	+		BWI76_RS23645	0.32	-2.6
4,934,453	+		BWI76_RS23645	0.32	-0.1
4,934,453	+		BWI76_RS23645	0.32	+0.1
4,934,453	+		BWI76_RS23645	0.32	+0.1
4,934,453	+		BWI76_RS23645	0.32	-0.3
4,934,453	+		BWI76_RS23645	0.32	+2.0
4,934,453	+		BWI76_RS23645	0.32	-0.0
4,934,453	+		BWI76_RS23645	0.32	-1.8
4,934,456	-		BWI76_RS23645	0.32	+3.3
4,934,458	+		BWI76_RS23645	0.32	-0.2
4,934,458	-		BWI76_RS23645	0.32	-0.4
4,934,458	-		BWI76_RS23645	0.32	+0.9
4,934,458	-		BWI76_RS23645	0.32	-0.7
4,934,458	-		BWI76_RS23645	0.32	-0.8
4,934,458	-		BWI76_RS23645	0.32	-0.2
4,934,461	+		BWI76_RS23645	0.33	-2.0
4,934,461	-		BWI76_RS23645	0.33	+1.1
4,934,461	-		BWI76_RS23645	0.33	+0.3
4,934,461	-		BWI76_RS23645	0.33	+0.5
4,934,461	-				-0.4
4,934,461	-		BWI76_RS23645	0.33	-2.5
4,934,461	-		BWI76_RS23645	0.33	-1.9
4,934,461	-		BWI76_RS23645	0.33	-0.4
4,934,461	-		BWI76_RS23645	0.33	+2.0
4,934,461	-		BWI76_RS23645	0.33	+1.3
4,934,461	-		BWI76_RS23645	0.33	-1.0
4,934,461	-		BWI76_RS23645	0.33	+0.2
4,934,461	-		BWI76_RS23645	0.33	-1.1
4,934,461	-		BWI76_RS23645	0.33	+0.2
4,934,461	-		BWI76_RS23645	0.33	+1.4
4,934,461	-		BWI76_RS23645	0.33	-1.0
4,934,466	-		BWI76_RS23645	0.33	+0.1
4,934,479	+		BWI76_RS23645	0.34	+0.2