Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15395

Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
3,224,001	-		BWI76_RS15390	0.15	-1.1
3,224,001	-		BWI76_RS15390	0.15	-1.4
3,224,099	-		BWI76_RS15390	0.25	-0.1
3,224,147	-		BWI76_RS15390	0.29	+0.6
3,224,192	-		BWI76_RS15390	0.34	+0.1
3,224,213	+		BWI76_RS15390	0.36	-1.3
3,224,213	+		BWI76_RS15390	0.36	-1.1
3,224,221	-		BWI76_RS15390	0.36	+1.4
3,224,235	-		BWI76_RS15390	0.38	+2.5
3,224,250	-		BWI76_RS15390	0.39	-2.1
3,224,263	+		BWI76_RS15390	0.40	-0.1
3,224,299	+		BWI76_RS15390	0.44	+0.2
3,224,352	+		BWI76_RS15390	0.49	-0.3
3,224,380	-		BWI76_RS15390	0.52	-0.3
3,224,402	-		BWI76_RS15390	0.54	+1.6
3,224,458	-		BWI76_RS15390	0.59	+0.3
3,224,502	-		BWI76_RS15390	0.64	-1.1
3,224,571	+		BWI76_RS15390	0.70	+0.7
3,224,670	-				-0.7
3,224,696	+		BWI76_RS15390	0.82	-1.0
3,224,740	-		BWI76_RS15390	0.87	+1.0
3,224,798	+				-1.0
3,224,798	+				-0.3
3,224,806	-				-1.8
3,224,806	-				-0.5
3,224,822	+				-0.1
3,224,822	+				+0.2
3,224,825	-				-2.6
3,224,828	-				+1.9
3,224,830	-				+0.7
3,224,830	-				-0.1
3,224,830	-				+0.0
3,224,831	+				-0.6
3,224,831	+				-3.2
3,224,831	-				+0.7
3,224,831	-				+1.5
3,224,832	-				-1.1
3,224,839	-				+3.1
3,224,842	+				+0.8
3,224,850	-				+0.9
3,224,895	-				+0.1
3,224,902	+				-0.1
3,224,902	+				+0.4
3,224,902	+				-0.4
3,224,902	+				-0.3
3,224,902	+				+3.0
3,224,902	+				+0.6
3,224,902	+				-0.4
3,224,902	+				+0.4
3,224,902	+				+0.8
3,224,902	+				-0.2
3,224,902	+				-1.7
3,224,902	+				-2.4
3,224,902	+				-1.5
3,224,902	+				-0.3
3,224,902	+				+1.3
3,224,910	-				-0.6
3,224,910	-				+1.5
3,224,910	-				+0.2
3,224,910	-				-2.1
3,224,910	-				+0.8
3,224,910	-				-0.0
3,224,910	-				+0.1
3,224,910	-				-1.5
3,224,910	-				-0.3
3,224,910	-				-0.6
3,224,910	-				-1.0
3,224,910	-				+0.3
3,224,910	-				-0.4
3,224,910	-				-0.5
3,224,910	-				-1.1
3,224,910	-				-1.2
3,224,910	-				+2.0
3,224,910	-				-0.9
3,224,910	-				-1.8
3,224,910	-				+6.0
3,224,910	-				-0.6
3,224,910	-				-1.6
3,224,910	-				-0.8
3,224,910	-				-1.6
3,224,910	-				-1.9
3,224,910	-				+0.5
3,224,924	+				-0.2
3,224,924	+				-0.4
3,224,924	+				-0.8
3,224,927	-				+0.7
3,224,932	-				+0.3
3,224,932	-				-0.1
3,224,975	-				+3.6
3,224,985	+				-0.4
3,224,998	-				+1.4
3,224,998	-				-3.1
3,224,998	-				-1.6
3,224,998	-				+0.8
3,225,009	+		BWI76_RS15395	0.11	-1.9
3,225,009	+		BWI76_RS15395	0.11	+1.4
3,225,009	+		BWI76_RS15395	0.11	+1.0
3,225,009	+		BWI76_RS15395	0.11	-1.2
3,225,017	-		BWI76_RS15395	0.11	-0.4
3,225,017	-		BWI76_RS15395	0.11	-0.5
3,225,017	-		BWI76_RS15395	0.11	-0.6
3,225,051	-		BWI76_RS15395	0.15	+2.0
3,225,051	-		BWI76_RS15395	0.15	-1.5
3,225,052	+		BWI76_RS15395	0.15	+1.7
3,225,057	+		BWI76_RS15395	0.16	+0.5
3,225,060	-		BWI76_RS15395	0.16	+2.6
3,225,065	-		BWI76_RS15395	0.16	-0.8
3,225,078	-		BWI76_RS15395	0.18	+4.4
3,225,095	-		BWI76_RS15395	0.19	-0.0
3,225,137	-		BWI76_RS15395	0.24	-1.0
3,225,146	+		BWI76_RS15395	0.25	-2.1
3,225,146	+		BWI76_RS15395	0.25	-1.9
3,225,154	-		BWI76_RS15395	0.25	-0.1
3,225,154	-		BWI76_RS15395	0.25	-0.3
3,225,154	-				-0.9
3,225,154	-		BWI76_RS15395	0.25	-0.8
3,225,156	+		BWI76_RS15395	0.26	+0.2
3,225,156	+		BWI76_RS15395	0.26	+1.3
3,225,156	+		BWI76_RS15395	0.26	-0.6
3,225,156	+		BWI76_RS15395	0.26	-0.1
3,225,156	+		BWI76_RS15395	0.26	-0.7
3,225,156	+		BWI76_RS15395	0.26	+1.3
3,225,156	+		BWI76_RS15395	0.26	-1.2
3,225,164	-		BWI76_RS15395	0.26	+1.0
3,225,164	-		BWI76_RS15395	0.26	-2.1
3,225,164	-		BWI76_RS15395	0.26	+0.4
3,225,164	-		BWI76_RS15395	0.26	-1.7
3,225,164	-		BWI76_RS15395	0.26	-0.7
3,225,164	-		BWI76_RS15395	0.26	-2.7
3,225,173	-		BWI76_RS15395	0.27	+0.5
3,225,275	+		BWI76_RS15395	0.38	+1.5
3,225,275	+		BWI76_RS15395	0.38	-1.9
3,225,283	-		BWI76_RS15395	0.39	-0.4
3,225,287	-		BWI76_RS15395	0.39	-0.1
3,225,293	+		BWI76_RS15395	0.40	-0.5
3,225,300	+		BWI76_RS15395	0.40	-1.4
3,225,307	+		BWI76_RS15395	0.41	-0.5
3,225,315	-		BWI76_RS15395	0.42	-2.4
3,225,315	-		BWI76_RS15395	0.42	+0.1
3,225,315	-		BWI76_RS15395	0.42	-1.9
3,225,315	-		BWI76_RS15395	0.42	-1.5
3,225,336	+		BWI76_RS15395	0.44	-0.2
3,225,336	+				+2.1
3,225,336	+		BWI76_RS15395	0.44	-0.2
3,225,344	-		BWI76_RS15395	0.45	+2.5
3,225,344	-		BWI76_RS15395	0.45	+1.5
3,225,344	-		BWI76_RS15395	0.45	-0.1
3,225,344	-		BWI76_RS15395	0.45	+2.1
3,225,344	-		BWI76_RS15395	0.45	+0.4
3,225,351	-		BWI76_RS15395	0.46	+0.7
3,225,360	+		BWI76_RS15395	0.47	-1.3
3,225,360	+		BWI76_RS15395	0.47	-0.9
3,225,360	+		BWI76_RS15395	0.47	+2.9
3,225,368	-		BWI76_RS15395	0.47	-1.1
3,225,368	-		BWI76_RS15395	0.47	+1.3
3,225,368	-		BWI76_RS15395	0.47	+0.2
3,225,368	-		BWI76_RS15395	0.47	-0.3
3,225,368	-		BWI76_RS15395	0.47	-0.6
3,225,368	-		BWI76_RS15395	0.47	-0.5
3,225,368	-				-0.6
3,225,368	-		BWI76_RS15395	0.47	-0.4
3,225,368	-		BWI76_RS15395	0.47	+0.1
3,225,400	+		BWI76_RS15395	0.51	+2.0
3,225,403	-		BWI76_RS15395	0.51	-1.7
3,225,403	-		BWI76_RS15395	0.51	-2.6
3,225,408	-		BWI76_RS15395	0.51	+1.2
3,225,408	-		BWI76_RS15395	0.51	+0.9
3,225,454	+		BWI76_RS15395	0.56	-2.2
3,225,454	+		BWI76_RS15395	0.56	-1.5
3,225,462	-		BWI76_RS15395	0.57	-0.8
3,225,462	-		BWI76_RS15395	0.57	+3.7
3,225,462	-		BWI76_RS15395	0.57	+2.0
3,225,462	-		BWI76_RS15395	0.57	-0.5
3,225,466	+		BWI76_RS15395	0.57	+0.3
3,225,466	+		BWI76_RS15395	0.57	-0.0
3,225,474	-		BWI76_RS15395	0.58	+0.7
3,225,474	-		BWI76_RS15395	0.58	+0.3
3,225,474	-		BWI76_RS15395	0.58	+1.2
3,225,474	-		BWI76_RS15395	0.58	+2.3
3,225,474	-		BWI76_RS15395	0.58	-1.9
3,225,474	-		BWI76_RS15395	0.58	+1.8
3,225,501	+		BWI76_RS15395	0.61	-2.6
3,225,513	+		BWI76_RS15395	0.62	-0.1
3,225,635	+		BWI76_RS15395	0.75	-0.2
3,225,635	+		BWI76_RS15395	0.75	+0.0
3,225,643	-		BWI76_RS15395	0.75	-1.7
3,225,697	-		BWI76_RS15395	0.81	-1.2
3,225,697	-		BWI76_RS15395	0.81	+0.5
3,225,735	-				+0.9
3,225,748	-		BWI76_RS15395	0.86	-0.0
3,225,751	-		BWI76_RS15395	0.87	-0.4
3,225,895	-				-0.3
3,225,962	-				-0.1
3,225,995	-				-0.2
3,226,008	-				-1.2
3,226,012	+				-0.5
3,226,014	+				+0.4
3,226,020	-				-1.5
3,226,020	-				+0.3
3,226,086	-				+1.7
3,226,088	-				+0.0
3,226,097	+				-1.2
3,226,196	+				+0.4
3,226,221	-				-0.9
3,226,254	-				+1.8
3,226,261	+				-1.2
3,226,269	-				+2.8
3,226,270	+				-2.9
3,226,270	+				-1.4
3,226,270	+				-1.8
3,226,290	-				+1.2
3,226,411	-				-0.2
3,226,469	-				-0.3
3,226,503	-				-1.7
3,226,550	+				-1.1
3,226,550	+		BWI76_RS15400	0.24	-0.9
3,226,558	-		BWI76_RS15400	0.26	+0.2
3,226,561	+		BWI76_RS15400	0.27	-1.3
3,226,562	+		BWI76_RS15400	0.28	-0.7
3,226,562	+		BWI76_RS15400	0.28	-0.2
3,226,562	+				+0.9
3,226,570	-		BWI76_RS15400	0.30	-1.0
3,226,579	-		BWI76_RS15400	0.33	-1.1
3,226,648	+		BWI76_RS15400	0.55	-0.8
3,226,744	-		BWI76_RS15400	0.86	+0.8
3,226,809	-				+1.2
3,226,835	+				-1.1
3,226,835	+				-0.3
3,226,855	+				+1.3
3,226,858	-				-3.2
3,226,875	+				+0.4