Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07295 and BWI76_RS07300 overlap by 4 nucleotides BWI76_RS07300 and BWI76_RS07305 are separated by 146 nucleotides
BWI76_RS07295: BWI76_RS07295 - 6-phospho-beta-glucosidase, at 1,535,676 to 1,537,100
_RS07295
BWI76_RS07300: BWI76_RS07300 - antitermination protein BlgG, at 1,537,097 to 1,537,936
_RS07300
BWI76_RS07305: BWI76_RS07305 - sucrose operon repressor, at 1,538,083 to 1,539,087
_RS07305
Position (kb)
1537
1538 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1536.102 kb on - strand, within BWI76_RS07295 at 1536.109 kb on + strand, within BWI76_RS07295 at 1536.284 kb on + strand, within BWI76_RS07295 at 1536.373 kb on - strand, within BWI76_RS07295 at 1536.423 kb on - strand, within BWI76_RS07295 at 1536.664 kb on - strand, within BWI76_RS07295 at 1536.788 kb on + strand, within BWI76_RS07295 at 1536.811 kb on - strand, within BWI76_RS07295 at 1536.941 kb on + strand, within BWI76_RS07295 at 1536.949 kb on - strand, within BWI76_RS07295 at 1537.184 kb on + strand, within BWI76_RS07300 at 1537.280 kb on - strand, within BWI76_RS07300 at 1537.280 kb on - strand, within BWI76_RS07300 at 1537.377 kb on + strand, within BWI76_RS07300 at 1537.588 kb on + strand, within BWI76_RS07300 at 1537.658 kb on + strand, within BWI76_RS07300 at 1537.665 kb on + strand, within BWI76_RS07300 at 1537.732 kb on + strand, within BWI76_RS07300 at 1537.863 kb on + strand at 1537.899 kb on + strand at 1537.949 kb on - strand at 1538.138 kb on - strand at 1538.412 kb on - strand, within BWI76_RS07305 at 1538.461 kb on + strand, within BWI76_RS07305 at 1538.597 kb on + strand, within BWI76_RS07305 at 1538.667 kb on + strand, within BWI76_RS07305 at 1538.667 kb on + strand, within BWI76_RS07305 at 1538.801 kb on - strand, within BWI76_RS07305 at 1538.907 kb on + strand, within BWI76_RS07305
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant remove 1,536,102 - BWI76_RS07295 0.30 -0.2 1,536,109 + BWI76_RS07295 0.30 -1.1 1,536,284 + BWI76_RS07295 0.43 -0.3 1,536,373 - BWI76_RS07295 0.49 +0.2 1,536,423 - BWI76_RS07295 0.52 -2.0 1,536,664 - BWI76_RS07295 0.69 -1.1 1,536,788 + BWI76_RS07295 0.78 -0.2 1,536,811 - BWI76_RS07295 0.80 -0.9 1,536,941 + BWI76_RS07295 0.89 -0.1 1,536,949 - BWI76_RS07295 0.89 +0.1 1,537,184 + BWI76_RS07300 0.10 -0.2 1,537,280 - BWI76_RS07300 0.22 +0.1 1,537,280 - BWI76_RS07300 0.22 +0.0 1,537,377 + BWI76_RS07300 0.33 -0.5 1,537,588 + BWI76_RS07300 0.58 -0.7 1,537,658 + BWI76_RS07300 0.67 +0.2 1,537,665 + BWI76_RS07300 0.68 -1.1 1,537,732 + BWI76_RS07300 0.76 -1.4 1,537,863 + +0.2 1,537,899 + -1.2 1,537,949 - +1.2 1,538,138 - -1.5 1,538,412 - BWI76_RS07305 0.33 +4.7 1,538,461 + BWI76_RS07305 0.38 -2.5 1,538,597 + BWI76_RS07305 0.51 -1.7 1,538,667 + BWI76_RS07305 0.58 -1.2 1,538,667 + BWI76_RS07305 0.58 -1.2 1,538,801 - BWI76_RS07305 0.71 -2.5 1,538,907 + BWI76_RS07305 0.82 -2.1
Or see this region's nucleotide sequence