Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19040 and BWI76_RS19045 are separated by 37 nucleotides BWI76_RS19045 and BWI76_RS19050 are separated by 317 nucleotides
BWI76_RS19040: BWI76_RS19040 - hypothetical protein, at 3,954,217 to 3,955,347
_RS19040
BWI76_RS19045: BWI76_RS19045 - capsular polysaccharide biosynthesis protein, at 3,955,385 to 3,956,353
_RS19045
BWI76_RS19050: BWI76_RS19050 - NAD(P)-dependent oxidoreductase, at 3,956,671 to 3,957,525
_RS19050
Position (kb)
3955
3956
3957 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 3954.461 kb on - strand, within BWI76_RS19040 at 3954.496 kb on - strand, within BWI76_RS19040 at 3954.496 kb on - strand, within BWI76_RS19040 at 3954.496 kb on - strand, within BWI76_RS19040 at 3954.506 kb on - strand, within BWI76_RS19040 at 3954.506 kb on - strand, within BWI76_RS19040 at 3954.714 kb on - strand, within BWI76_RS19040 at 3954.782 kb on - strand, within BWI76_RS19040 at 3955.187 kb on - strand, within BWI76_RS19040 at 3955.673 kb on - strand, within BWI76_RS19045 at 3955.800 kb on - strand, within BWI76_RS19045 at 3955.800 kb on - strand, within BWI76_RS19045 at 3955.810 kb on - strand, within BWI76_RS19045 at 3955.810 kb on - strand, within BWI76_RS19045 at 3955.810 kb on - strand, within BWI76_RS19045 at 3955.948 kb on - strand, within BWI76_RS19045 at 3955.967 kb on - strand, within BWI76_RS19045 at 3956.156 kb on - strand, within BWI76_RS19045 at 3956.169 kb on - strand, within BWI76_RS19045 at 3956.169 kb on - strand, within BWI76_RS19045 at 3956.286 kb on - strand at 3956.552 kb on - strand at 3956.578 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.712 kb on - strand at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.788 kb on - strand, within BWI76_RS19050 at 3956.794 kb on - strand, within BWI76_RS19050 at 3956.794 kb on - strand, within BWI76_RS19050 at 3956.815 kb on - strand, within BWI76_RS19050 at 3956.815 kb on - strand, within BWI76_RS19050 at 3956.970 kb on - strand, within BWI76_RS19050 at 3956.979 kb on - strand, within BWI76_RS19050 at 3956.979 kb on - strand, within BWI76_RS19050 at 3956.985 kb on - strand, within BWI76_RS19050 at 3956.989 kb on - strand, within BWI76_RS19050 at 3957.040 kb on - strand, within BWI76_RS19050 at 3957.040 kb on - strand, within BWI76_RS19050 at 3957.047 kb on - strand, within BWI76_RS19050 at 3957.206 kb on - strand at 3957.251 kb on - strand, within BWI76_RS19050 at 3957.331 kb on - strand, within BWI76_RS19050
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant remove 3,954,461 - BWI76_RS19040 0.22 -3.8 3,954,496 - BWI76_RS19040 0.25 -4.4 3,954,496 - BWI76_RS19040 0.25 -0.7 3,954,496 - BWI76_RS19040 0.25 -3.6 3,954,506 - BWI76_RS19040 0.26 +0.4 3,954,506 - BWI76_RS19040 0.26 -3.8 3,954,714 - BWI76_RS19040 0.44 -4.7 3,954,782 - BWI76_RS19040 0.50 -3.3 3,955,187 - BWI76_RS19040 0.86 -3.9 3,955,673 - BWI76_RS19045 0.30 -3.8 3,955,800 - BWI76_RS19045 0.43 -2.2 3,955,800 - BWI76_RS19045 0.43 -4.2 3,955,810 - BWI76_RS19045 0.44 -2.8 3,955,810 - BWI76_RS19045 0.44 -4.9 3,955,810 - BWI76_RS19045 0.44 -4.1 3,955,948 - BWI76_RS19045 0.58 -2.1 3,955,967 - BWI76_RS19045 0.60 -3.5 3,956,156 - BWI76_RS19045 0.80 -3.7 3,956,169 - BWI76_RS19045 0.81 -2.9 3,956,169 - BWI76_RS19045 0.81 -0.9 3,956,286 - -5.4 3,956,552 - -0.2 3,956,578 - +2.1 3,956,677 - -0.4 3,956,677 - +0.2 3,956,677 - -1.6 3,956,677 - +0.8 3,956,677 - -0.2 3,956,677 - +0.6 3,956,677 - +0.2 3,956,677 - -0.8 3,956,712 - -5.7 3,956,757 - BWI76_RS19050 0.10 -1.2 3,956,757 - BWI76_RS19050 0.10 -3.7 3,956,757 - BWI76_RS19050 0.10 -4.8 3,956,757 - BWI76_RS19050 0.10 -5.3 3,956,757 - BWI76_RS19050 0.10 -3.7 3,956,757 - BWI76_RS19050 0.10 -2.7 3,956,757 - BWI76_RS19050 0.10 -3.9 3,956,757 - BWI76_RS19050 0.10 -4.2 3,956,757 - BWI76_RS19050 0.10 -4.9 3,956,757 - BWI76_RS19050 0.10 -2.0 3,956,788 - BWI76_RS19050 0.14 -5.1 3,956,794 - BWI76_RS19050 0.14 -2.9 3,956,794 - BWI76_RS19050 0.14 -3.9 3,956,815 - BWI76_RS19050 0.17 -2.8 3,956,815 - BWI76_RS19050 0.17 -0.6 3,956,970 - BWI76_RS19050 0.35 -4.0 3,956,979 - BWI76_RS19050 0.36 -1.5 3,956,979 - BWI76_RS19050 0.36 -4.6 3,956,985 - BWI76_RS19050 0.37 -5.3 3,956,989 - BWI76_RS19050 0.37 -4.6 3,957,040 - BWI76_RS19050 0.43 -1.4 3,957,040 - BWI76_RS19050 0.43 -3.4 3,957,047 - BWI76_RS19050 0.44 -3.8 3,957,206 - +0.1 3,957,251 - BWI76_RS19050 0.68 -3.7 3,957,331 - BWI76_RS19050 0.77 -0.3
Or see this region's nucleotide sequence