Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15110

Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
3,165,279	-		BWI76_RS15105	0.43	-0.0
3,165,284	+		BWI76_RS15105	0.43	-2.5
3,165,284	-		BWI76_RS15105	0.43	-0.0
3,165,294	+		BWI76_RS15105	0.44	-2.3
3,165,294	+		BWI76_RS15105	0.44	+1.4
3,165,294	+		BWI76_RS15105	0.44	+0.7
3,165,302	-		BWI76_RS15105	0.45	+0.0
3,165,302	-		BWI76_RS15105	0.45	-0.0
3,165,302	-		BWI76_RS15105	0.45	-0.1
3,165,302	-		BWI76_RS15105	0.45	-0.4
3,165,302	-		BWI76_RS15105	0.45	-0.1
3,165,302	-		BWI76_RS15105	0.45	-0.1
3,165,373	+				+0.1
3,165,402	+		BWI76_RS15105	0.51	-0.8
3,165,412	+		BWI76_RS15105	0.52	-1.4
3,165,418	+		BWI76_RS15105	0.52	+1.2
3,165,467	-		BWI76_RS15105	0.55	+0.3
3,165,476	+		BWI76_RS15105	0.56	+0.5
3,165,476	+		BWI76_RS15105	0.56	-0.7
3,165,484	-		BWI76_RS15105	0.57	-0.4
3,165,486	+		BWI76_RS15105	0.57	-0.3
3,165,502	-		BWI76_RS15105	0.58	-0.4
3,165,504	+		BWI76_RS15105	0.58	-0.0
3,165,504	+		BWI76_RS15105	0.58	+1.0
3,165,509	+		BWI76_RS15105	0.58	-0.1
3,165,510	-		BWI76_RS15105	0.58	-0.4
3,165,512	-		BWI76_RS15105	0.58	-0.3
3,165,512	-		BWI76_RS15105	0.58	+0.2
3,165,512	-		BWI76_RS15105	0.58	-2.5
3,165,512	-		BWI76_RS15105	0.58	-1.4
3,165,526	-		BWI76_RS15105	0.59	+0.7
3,165,526	-		BWI76_RS15105	0.59	-0.7
3,165,590	-		BWI76_RS15105	0.64	+1.3
3,165,614	-		BWI76_RS15105	0.65	+1.1
3,165,616	-		BWI76_RS15105	0.65	-1.6
3,165,616	-		BWI76_RS15105	0.65	-1.6
3,165,629	+		BWI76_RS15105	0.66	-0.2
3,165,634	+		BWI76_RS15105	0.66	-1.2
3,165,649	+		BWI76_RS15105	0.67	-1.2
3,165,649	+		BWI76_RS15105	0.67	-1.3
3,165,649	+		BWI76_RS15105	0.67	-0.9
3,165,649	+		BWI76_RS15105	0.67	-0.8
3,165,649	+		BWI76_RS15105	0.67	+0.0
3,165,649	+		BWI76_RS15105	0.67	+0.6
3,165,649	+		BWI76_RS15105	0.67	+1.3
3,165,657	-		BWI76_RS15105	0.68	+2.0
3,165,657	-		BWI76_RS15105	0.68	-3.0
3,165,657	-		BWI76_RS15105	0.68	+0.6
3,165,657	-		BWI76_RS15105	0.68	-0.4
3,165,657	-		BWI76_RS15105	0.68	-0.6
3,165,657	-		BWI76_RS15105	0.68	-1.6
3,165,707	+		BWI76_RS15105	0.71	-1.4
3,165,715	-		BWI76_RS15105	0.72	+0.1
3,165,721	+		BWI76_RS15105	0.72	-1.3
3,165,728	+				+0.1
3,165,741	-		BWI76_RS15105	0.74	-0.4
3,165,760	-		BWI76_RS15105	0.75	+2.5
3,165,760	-		BWI76_RS15105	0.75	-0.2
3,165,770	-		BWI76_RS15105	0.75	+0.8
3,165,791	+				+3.0
3,165,804	-		BWI76_RS15105	0.78	-0.5
3,165,849	+		BWI76_RS15105	0.81	-1.5
3,165,858	-		BWI76_RS15105	0.81	-1.0
3,165,890	-		BWI76_RS15105	0.83	-0.0
3,165,890	-		BWI76_RS15105	0.83	+1.1
3,165,900	+		BWI76_RS15105	0.84	-0.7
3,165,910	+		BWI76_RS15105	0.85	-0.5
3,165,918	-		BWI76_RS15105	0.85	-0.7
3,165,918	-		BWI76_RS15105	0.85	+0.0
3,165,918	-		BWI76_RS15105	0.85	+1.2
3,165,918	-		BWI76_RS15105	0.85	-1.6
3,165,918	-		BWI76_RS15105	0.85	+0.8
3,165,950	+		BWI76_RS15105	0.87	+5.8
3,165,963	+		BWI76_RS15105	0.88	+1.1
3,166,019	+				-0.5
3,166,019	+				-0.9
3,166,021	+				+0.4
3,166,021	+				+0.5
3,166,021	+				-1.6
3,166,021	+				-1.6
3,166,029	+				-0.6
3,166,031	+				-0.0
3,166,088	+				-0.1
3,166,094	+				-0.1
3,166,123	+				-0.2
3,166,203	+				-0.7
3,166,211	-				-1.2
3,166,215	-				+0.9
3,166,220	-				-0.3
3,166,220	-				-0.3
3,166,230	-				-2.9
3,166,230	-				-0.5
3,166,232	-				+0.2
3,166,291	-				-0.1
3,166,291	-				-2.8
3,166,300	-				-4.5
3,166,301	-				-1.5
3,166,302	-				-4.7
3,166,302	-				-2.2
3,166,308	-				-3.9
3,166,338	+				-2.6
3,166,346	-				-4.0
3,166,389	-				-4.8
3,166,389	-				-4.0
3,166,439	-				-3.3
3,166,441	-				-2.9
3,166,441	-				-0.8
3,166,441	-				-4.9
3,166,441	-				-4.7
3,166,448	-				-4.4
3,166,510	-		BWI76_RS15110	0.12	-4.4
3,166,629	+		BWI76_RS15110	0.18	-2.6
3,166,681	+		BWI76_RS15110	0.20	-3.4
3,166,682	+		BWI76_RS15110	0.20	-0.8
3,166,682	+		BWI76_RS15110	0.20	-0.8
3,166,691	-		BWI76_RS15110	0.20	-2.7
3,166,691	-		BWI76_RS15110	0.20	-3.9
3,166,691	-		BWI76_RS15110	0.20	-3.9
3,166,691	-		BWI76_RS15110	0.20	-2.7
3,166,691	-		BWI76_RS15110	0.20	-2.0
3,166,691	-		BWI76_RS15110	0.20	-2.3
3,166,691	-		BWI76_RS15110	0.20	-3.0
3,166,691	-		BWI76_RS15110	0.20	-1.3
3,166,737	-		BWI76_RS15110	0.22	-1.3
3,166,742	-		BWI76_RS15110	0.23	-3.8
3,166,750	-		BWI76_RS15110	0.23	-1.3
3,166,750	-		BWI76_RS15110	0.23	-1.7
3,166,755	-		BWI76_RS15110	0.23	-1.9
3,166,755	-		BWI76_RS15110	0.23	+2.2
3,166,755	-		BWI76_RS15110	0.23	-3.0
3,166,758	+		BWI76_RS15110	0.23	-1.0
3,166,760	-		BWI76_RS15110	0.23	-2.7
3,166,769	-		BWI76_RS15110	0.24	-3.9
3,166,771	+		BWI76_RS15110	0.24	+1.2
3,166,771	+		BWI76_RS15110	0.24	-0.9
3,166,771	+		BWI76_RS15110	0.24	-3.3
3,166,779	-		BWI76_RS15110	0.24	-4.7
3,166,779	-				-0.5
3,166,812	-		BWI76_RS15110	0.26	-2.3
3,166,817	-		BWI76_RS15110	0.26	-1.0
3,166,833	-		BWI76_RS15110	0.27	-2.4
3,166,835	+		BWI76_RS15110	0.27	-2.5
3,166,852	-		BWI76_RS15110	0.28	-1.1
3,166,900	-		BWI76_RS15110	0.30	-2.4
3,166,981	+		BWI76_RS15110	0.33	-2.6
3,166,989	-		BWI76_RS15110	0.34	-4.5
3,167,015	-		BWI76_RS15110	0.35	-1.3
3,167,048	-		BWI76_RS15110	0.36	-1.4
3,167,048	-		BWI76_RS15110	0.36	-3.9
3,167,054	+		BWI76_RS15110	0.36	-1.5
3,167,062	-		BWI76_RS15110	0.37	-0.5
3,167,095	-		BWI76_RS15110	0.38	-1.8
3,167,201	-		BWI76_RS15110	0.43	-1.1
3,167,201	-		BWI76_RS15110	0.43	-2.0
3,167,292	-		BWI76_RS15110	0.47	-2.3
3,167,336	-		BWI76_RS15110	0.49	-0.5
3,167,336	-		BWI76_RS15110	0.49	-1.8
3,167,390	-		BWI76_RS15110	0.51	-1.9
3,167,392	+				-0.3
3,167,392	+		BWI76_RS15110	0.51	-2.1
3,167,393	-		BWI76_RS15110	0.51	-4.3
3,167,397	+		BWI76_RS15110	0.52	-0.1
3,167,397	+		BWI76_RS15110	0.52	-2.5
3,167,397	+		BWI76_RS15110	0.52	-0.1
3,167,405	-		BWI76_RS15110	0.52	-2.3
3,167,405	-				-0.4
3,167,465	-		BWI76_RS15110	0.55	-0.4
3,167,489	+		BWI76_RS15110	0.56	-2.2
3,167,496	-		BWI76_RS15110	0.56	-2.1
3,167,497	-		BWI76_RS15110	0.56	-0.8
3,167,497	-		BWI76_RS15110	0.56	-2.6
3,167,497	-		BWI76_RS15110	0.56	-2.9
3,167,497	-		BWI76_RS15110	0.56	-1.9
3,167,497	-		BWI76_RS15110	0.56	+0.1
3,167,497	-		BWI76_RS15110	0.56	-1.9
3,167,497	-		BWI76_RS15110	0.56	-2.9
3,167,497	-		BWI76_RS15110	0.56	-2.7
3,167,497	-		BWI76_RS15110	0.56	-2.1
3,167,497	-				-0.9
3,167,497	-		BWI76_RS15110	0.56	-1.1
3,167,497	-		BWI76_RS15110	0.56	-0.9
3,167,497	-		BWI76_RS15110	0.56	-1.3
3,167,497	-				+0.2
3,167,526	-				-0.8
3,167,532	-		BWI76_RS15110	0.58	-2.2
3,167,537	+		BWI76_RS15110	0.58	-1.5
3,167,588	-		BWI76_RS15110	0.60	-1.8
3,167,620	-		BWI76_RS15110	0.61	-1.4
3,167,620	-		BWI76_RS15110	0.61	-1.1
3,167,640	-		BWI76_RS15110	0.62	-2.9
3,167,694	-		BWI76_RS15110	0.65	-1.7
3,167,720	-		BWI76_RS15110	0.66	-2.5
3,167,816	-		BWI76_RS15110	0.70	-1.9
3,167,823	+		BWI76_RS15110	0.70	-3.3
3,167,823	+		BWI76_RS15110	0.70	-0.4
3,167,831	-				-1.4
3,167,831	-		BWI76_RS15110	0.71	-3.0
3,168,059	-		BWI76_RS15110	0.81	-1.4
3,168,064	-		BWI76_RS15110	0.81	-4.1
3,168,075	+				+0.6
3,168,088	-		BWI76_RS15110	0.82	-3.6
3,168,340	-				-1.0
3,168,610	-				-0.6
3,168,964	-		BWI76_RS15115	0.38	-0.7
3,169,276	-		BWI76_RS15115	0.63	+1.6
3,169,285	+		BWI76_RS15115	0.64	+1.2
3,169,285	+		BWI76_RS15115	0.64	+1.0
3,169,285	+		BWI76_RS15115	0.64	+0.2
3,169,293	-		BWI76_RS15115	0.65	+0.7
3,169,293	-		BWI76_RS15115	0.65	+0.6
3,169,293	-		BWI76_RS15115	0.65	-1.6
3,169,293	-		BWI76_RS15115	0.65	-0.4
3,169,293	-		BWI76_RS15115	0.65	-0.8
3,169,293	-		BWI76_RS15115	0.65	+0.1
3,169,293	-		BWI76_RS15115	0.65	-0.8
3,169,293	-		BWI76_RS15115	0.65	-1.4
3,169,293	-		BWI76_RS15115	0.65	-1.6
3,169,293	-		BWI76_RS15115	0.65	-0.3
3,169,293	-		BWI76_RS15115	0.65	-0.1
3,169,380	-				+2.0
3,169,394	-		BWI76_RS15115	0.73	-2.7