Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26430 and BWI76_RS26435 are separated by 166 nucleotides BWI76_RS26435 and BWI76_RS26440 are separated by 73 nucleotides BWI76_RS26440 and BWI76_RS26445 are separated by 0 nucleotides
BWI76_RS26430: BWI76_RS26430 - sulfurtransferase TusA, at 5,471,248 to 5,471,493
_RS26430
BWI76_RS26435: BWI76_RS26435 - hypothetical protein, at 5,471,660 to 5,472,325
_RS26435
BWI76_RS26440: BWI76_RS26440 - hypothetical protein, at 5,472,399 to 5,472,956
_RS26440
BWI76_RS26445: BWI76_RS26445 - MFS transporter, at 5,472,957 to 5,474,177
_RS26445
Position (kb) 5472
5473 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5471.530 kb on - strand at 5471.561 kb on - strand at 5471.620 kb on - strand at 5471.706 kb on - strand at 5471.889 kb on + strand, within BWI76_RS26435 at 5471.889 kb on + strand, within BWI76_RS26435 at 5471.907 kb on - strand, within BWI76_RS26435 at 5471.926 kb on + strand, within BWI76_RS26435 at 5472.117 kb on + strand, within BWI76_RS26435 at 5472.200 kb on + strand, within BWI76_RS26435 at 5472.320 kb on + strand at 5472.320 kb on + strand at 5472.320 kb on + strand at 5472.328 kb on - strand at 5472.617 kb on + strand, within BWI76_RS26440 at 5472.957 kb on + strand at 5472.957 kb on + strand at 5473.226 kb on + strand, within BWI76_RS26445 at 5473.395 kb on + strand, within BWI76_RS26445 at 5473.403 kb on - strand, within BWI76_RS26445 at 5473.418 kb on - strand, within BWI76_RS26445 at 5473.463 kb on - strand, within BWI76_RS26445 at 5473.524 kb on + strand, within BWI76_RS26445 at 5473.524 kb on + strand, within BWI76_RS26445 at 5473.532 kb on - strand, within BWI76_RS26445 at 5473.532 kb on - strand, within BWI76_RS26445 at 5473.688 kb on - strand, within BWI76_RS26445 at 5473.769 kb on + strand, within BWI76_RS26445 at 5473.791 kb on + strand, within BWI76_RS26445 at 5473.822 kb on + strand, within BWI76_RS26445
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant remove 5,471,530 - -0.2 5,471,561 - +1.8 5,471,620 - -0.4 5,471,706 - -0.4 5,471,889 + BWI76_RS26435 0.34 +1.4 5,471,889 + BWI76_RS26435 0.34 -0.0 5,471,907 - BWI76_RS26435 0.37 -0.4 5,471,926 + BWI76_RS26435 0.40 -0.8 5,472,117 + BWI76_RS26435 0.69 -0.1 5,472,200 + BWI76_RS26435 0.81 +0.0 5,472,320 + -0.1 5,472,320 + -0.1 5,472,320 + +0.9 5,472,328 - +0.4 5,472,617 + BWI76_RS26440 0.39 -1.4 5,472,957 + +1.0 5,472,957 + -1.0 5,473,226 + BWI76_RS26445 0.22 +0.1 5,473,395 + BWI76_RS26445 0.36 -0.6 5,473,403 - BWI76_RS26445 0.37 +0.3 5,473,418 - BWI76_RS26445 0.38 +0.7 5,473,463 - BWI76_RS26445 0.41 +0.2 5,473,524 + BWI76_RS26445 0.46 +0.6 5,473,524 + BWI76_RS26445 0.46 -0.7 5,473,532 - BWI76_RS26445 0.47 +0.1 5,473,532 - BWI76_RS26445 0.47 +0.2 5,473,688 - BWI76_RS26445 0.60 -0.2 5,473,769 + BWI76_RS26445 0.67 -2.2 5,473,791 + BWI76_RS26445 0.68 +2.4 5,473,822 + BWI76_RS26445 0.71 +0.9
Or see this region's nucleotide sequence