Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21965

Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI
4,587,326	+		BWI76_RS21960	0.13	-0.1
4,587,435	-		BWI76_RS21960	0.23	+0.4
4,587,461	+		BWI76_RS21960	0.25	+0.1
4,587,620	+		BWI76_RS21960	0.40	-0.9
4,587,681	-		BWI76_RS21960	0.45	-0.4
4,587,712	+		BWI76_RS21960	0.48	-0.5
4,588,085	+		BWI76_RS21960	0.82	-1.3
4,588,108	+		BWI76_RS21960	0.84	+1.7
4,588,300	-				+0.2
4,588,453	-				+1.4
4,588,784	-		BWI76_RS21965	0.19	-0.7
4,588,903	+		BWI76_RS21965	0.24	-2.1
4,588,911	-		BWI76_RS21965	0.24	-0.7
4,588,911	-		BWI76_RS21965	0.24	+1.9
4,588,971	+		BWI76_RS21965	0.26	+0.5
4,588,980	-		BWI76_RS21965	0.27	-1.2
4,589,001	-		BWI76_RS21965	0.28	+0.1
4,589,134	+		BWI76_RS21965	0.33	-0.2
4,589,139	+		BWI76_RS21965	0.33	+3.6
4,589,139	+		BWI76_RS21965	0.33	+1.6
4,589,147	-		BWI76_RS21965	0.33	+2.5
4,589,235	+		BWI76_RS21965	0.37	+0.2
4,589,400	+		BWI76_RS21965	0.43	+0.6
4,589,542	-		BWI76_RS21965	0.49	+0.6
4,589,774	-		BWI76_RS21965	0.58	-1.1
4,589,953	-		BWI76_RS21965	0.65	+0.3
4,590,027	-		BWI76_RS21965	0.68	-0.0
4,590,311	+		BWI76_RS21965	0.79	-0.1
4,590,460	-		BWI76_RS21965	0.85	-0.2
4,590,474	-				-0.6
4,590,482	-		BWI76_RS21965	0.86	-0.1
4,590,521	-		BWI76_RS21965	0.88	-1.5
4,590,552	+				+2.2
4,590,604	+				+0.7
4,590,614	+				-0.0
4,590,614	+				+1.7
4,590,614	+				+0.1
4,590,614	+				+1.6
4,590,614	+				-0.3
4,590,617	-				-0.5
4,590,617	-				+0.3
4,590,617	-				-0.2
4,590,622	-				-1.3
4,590,622	-				+0.4
4,590,622	-				+0.6
4,590,622	-				-0.4
4,590,622	-				+0.7
4,590,654	+				+0.5
4,590,657	-				+0.4
4,590,698	+				-1.3
4,590,699	+				-0.5
4,590,704	+				+0.3
4,590,704	+				+0.9
4,590,704	+				+0.0
4,590,706	+				+2.0
4,590,709	+				-0.9
4,590,712	-				-0.4
4,590,712	-				-0.7
4,590,723	+				-0.8
4,590,737	-				-1.0
4,590,739	-				+0.3
4,590,739	-				-0.1
4,590,739	-				+0.8
4,590,764	+				-0.8
4,590,838	+				+0.2
4,590,838	+				-0.5
4,590,880	+				-1.0
4,590,880	+				-0.2
4,590,880	+				-0.7
4,590,896	+				-2.4
4,590,896	+				+1.8
4,590,896	+				+0.5
4,590,896	+				-0.6
4,590,898	+				-0.0
4,590,904	-				+0.5
4,590,906	-				+1.0
4,590,906	-				-0.1
4,590,919	-				+0.1
4,590,919	-				+1.0
4,590,921	+				-0.4
4,590,929	-		BWI76_RS21970	0.10	-0.4
4,590,941	-		BWI76_RS21970	0.12	+0.7
4,590,944	+		BWI76_RS21970	0.12	+0.4
4,590,952	+		BWI76_RS21970	0.13	+2.1
4,590,952	-		BWI76_RS21970	0.13	+0.6
4,590,960	+		BWI76_RS21970	0.15	+0.9
4,590,960	-		BWI76_RS21970	0.15	+0.4
4,590,960	-		BWI76_RS21970	0.15	-0.1
4,590,960	-		BWI76_RS21970	0.15	+0.4
4,590,960	-		BWI76_RS21970	0.15	+3.7
4,590,969	-		BWI76_RS21970	0.16	+0.4
4,590,976	+		BWI76_RS21970	0.17	+0.7
4,590,984	-		BWI76_RS21970	0.18	+0.1
4,590,984	-		BWI76_RS21970	0.18	-0.5
4,590,984	-		BWI76_RS21970	0.18	+0.8
4,590,984	-		BWI76_RS21970	0.18	-1.2
4,591,036	+		BWI76_RS21970	0.26	-0.5
4,591,037	+		BWI76_RS21970	0.26	+0.1
4,591,051	+		BWI76_RS21970	0.28	-0.3
4,591,059	-		BWI76_RS21970	0.30	-0.4
4,591,077	+		BWI76_RS21970	0.32	+0.4
4,591,077	+		BWI76_RS21970	0.32	-0.2
4,591,077	+		BWI76_RS21970	0.32	+0.5
4,591,080	-		BWI76_RS21970	0.33	+0.8
4,591,085	-		BWI76_RS21970	0.34	+3.3
4,591,085	-		BWI76_RS21970	0.34	-1.5
4,591,085	-		BWI76_RS21970	0.34	-1.1
4,591,085	-		BWI76_RS21970	0.34	-0.1
4,591,085	-		BWI76_RS21970	0.34	-1.5
4,591,085	-		BWI76_RS21970	0.34	-0.9
4,591,085	-		BWI76_RS21970	0.34	+0.8
4,591,085	-		BWI76_RS21970	0.34	+0.6
4,591,088	+		BWI76_RS21970	0.34	+0.5
4,591,093	-		BWI76_RS21970	0.35	-0.5
4,591,097	-		BWI76_RS21970	0.35	-0.1
4,591,106	-		BWI76_RS21970	0.37	-0.7
4,591,107	-		BWI76_RS21970	0.37	+0.2
4,591,116	-		BWI76_RS21970	0.38	-0.4
4,591,164	-		BWI76_RS21970	0.46	-0.7
4,591,189	+		BWI76_RS21970	0.49	-0.3
4,591,206	-		BWI76_RS21970	0.52	-1.6
4,591,235	+		BWI76_RS21970	0.56	-1.5
4,591,269	+		BWI76_RS21970	0.62	+1.8
4,591,269	+		BWI76_RS21970	0.62	+1.8
4,591,269	+		BWI76_RS21970	0.62	+0.4
4,591,271	+		BWI76_RS21970	0.62	-0.2
4,591,277	-		BWI76_RS21970	0.63	+0.3
4,591,277	-		BWI76_RS21970	0.63	-1.5
4,591,277	-		BWI76_RS21970	0.63	+0.7
4,591,277	-		BWI76_RS21970	0.63	-1.4
4,591,277	-		BWI76_RS21970	0.63	+0.7
4,591,277	-		BWI76_RS21970	0.63	-1.5
4,591,277	-				+1.5
4,591,279	+		BWI76_RS21970	0.63	-1.3
4,591,279	+		BWI76_RS21970	0.63	+2.7
4,591,279	+		BWI76_RS21970	0.63	-0.1
4,591,279	+		BWI76_RS21970	0.63	-0.2
4,591,279	+		BWI76_RS21970	0.63	-0.1
4,591,279	+		BWI76_RS21970	0.63	+0.2
4,591,287	-		BWI76_RS21970	0.64	+0.9
4,591,287	-		BWI76_RS21970	0.64	-1.0
4,591,287	-		BWI76_RS21970	0.64	+0.2
4,591,287	-		BWI76_RS21970	0.64	+0.3
4,591,287	-		BWI76_RS21970	0.64	-0.4
4,591,287	-		BWI76_RS21970	0.64	+0.5
4,591,287	-		BWI76_RS21970	0.64	+1.2
4,591,287	-		BWI76_RS21970	0.64	-0.4
4,591,287	-		BWI76_RS21970	0.64	+0.6
4,591,287	-		BWI76_RS21970	0.64	-1.7
4,591,349	+		BWI76_RS21970	0.74	-0.7
4,591,372	+		BWI76_RS21970	0.77	+0.7
4,591,376	+		BWI76_RS21970	0.78	+0.4
4,591,394	-		BWI76_RS21970	0.80	-1.3
4,591,394	-		BWI76_RS21970	0.80	-0.2
4,591,451	+		BWI76_RS21970	0.89	+0.9
4,591,457	-				-0.5
4,591,461	+				-0.3
4,591,461	+				+1.2
4,591,461	+				+0.8
4,591,469	-				+0.9
4,591,469	-				-0.2
4,591,469	-				+0.8
4,591,469	-				-0.8
4,591,479	-				+1.1
4,591,479	-				-1.6
4,591,487	-				+0.0
4,591,497	-				-0.8
4,591,504	-				+1.0
4,591,562	+				+1.4
4,591,562	+				-0.4
4,591,562	+				+0.0
4,591,562	+				+1.1
4,591,562	+				-0.4
4,591,602	+				-0.8
4,591,611	-				-1.4
4,591,618	-				-1.3
4,591,626	+				+0.9
4,591,636	-				+0.6
4,591,638	+				-0.6
4,591,643	-				+0.9
4,591,653	-				-0.2
4,591,659	-				-1.8
4,591,661	+				-0.6
4,591,661	+				+0.6
4,591,669	-				+1.5
4,591,675	+				+0.7
4,591,693	-				+0.1
4,591,697	+				-0.3
4,591,702	+				+0.4
4,591,705	-				-0.5
4,591,705	-				+0.4
4,591,705	-				+0.3
4,591,710	-				-0.5
4,591,732	+		BWI76_RS21975	0.10	-0.6
4,591,732	+		BWI76_RS21975	0.10	-0.3
4,591,732	+		BWI76_RS21975	0.10	+0.8
4,591,732	+		BWI76_RS21975	0.10	+0.1
4,591,732	+		BWI76_RS21975	0.10	+0.5
4,591,732	+		BWI76_RS21975	0.10	+1.3
4,591,732	+		BWI76_RS21975	0.10	+0.6
4,591,740	-		BWI76_RS21975	0.11	-0.3
4,591,740	-		BWI76_RS21975	0.11	+1.2
4,591,740	-		BWI76_RS21975	0.11	+0.5
4,591,740	-		BWI76_RS21975	0.11	-0.3
4,591,740	-		BWI76_RS21975	0.11	-0.6
4,591,740	-		BWI76_RS21975	0.11	-1.7
4,591,740	-		BWI76_RS21975	0.11	-0.4
4,591,740	-		BWI76_RS21975	0.11	-0.2
4,591,830	+		BWI76_RS21975	0.26	+1.0