Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00595 and BWI76_RS00600 are separated by 106 nucleotides BWI76_RS00600 and BWI76_RS00605 are separated by 114 nucleotides
BWI76_RS00595: BWI76_RS00595 - MFS transporter, at 118,344 to 119,621
_RS00595
BWI76_RS00600: BWI76_RS00600 - LacI family transcriptional regulator, at 119,728 to 120,723
_RS00600
BWI76_RS00605: BWI76_RS00605 - alpha-galactosidase, at 120,838 to 122,961
_RS00605
Position (kb) 119
120
121 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 118.757 kb on - strand, within BWI76_RS00595 at 118.914 kb on + strand, within BWI76_RS00595 at 118.951 kb on + strand, within BWI76_RS00595 at 118.970 kb on - strand, within BWI76_RS00595 at 118.999 kb on - strand, within BWI76_RS00595 at 119.012 kb on + strand, within BWI76_RS00595 at 119.120 kb on + strand, within BWI76_RS00595 at 119.151 kb on - strand, within BWI76_RS00595 at 119.242 kb on - strand, within BWI76_RS00595 at 119.259 kb on - strand, within BWI76_RS00595 at 119.274 kb on + strand, within BWI76_RS00595 at 119.435 kb on + strand, within BWI76_RS00595 at 119.482 kb on - strand, within BWI76_RS00595 at 119.850 kb on - strand, within BWI76_RS00600 at 119.890 kb on - strand, within BWI76_RS00600 at 120.058 kb on - strand, within BWI76_RS00600 at 120.072 kb on - strand, within BWI76_RS00600 at 120.072 kb on - strand, within BWI76_RS00600 at 120.118 kb on - strand, within BWI76_RS00600 at 120.418 kb on - strand, within BWI76_RS00600 at 120.613 kb on + strand, within BWI76_RS00600 at 121.130 kb on + strand, within BWI76_RS00605 at 121.201 kb on + strand, within BWI76_RS00605 at 121.222 kb on + strand, within BWI76_RS00605 at 121.230 kb on - strand, within BWI76_RS00605 at 121.284 kb on + strand, within BWI76_RS00605 at 121.458 kb on + strand, within BWI76_RS00605 at 121.644 kb on - strand, within BWI76_RS00605 at 121.654 kb on - strand, within BWI76_RS00605 at 121.720 kb on + strand, within BWI76_RS00605
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with Trichoderma atroviridae IMI remove 118,757 - BWI76_RS00595 0.32 +2.0 118,914 + BWI76_RS00595 0.45 +1.1 118,951 + BWI76_RS00595 0.47 +1.0 118,970 - BWI76_RS00595 0.49 -0.9 118,999 - BWI76_RS00595 0.51 -0.2 119,012 + BWI76_RS00595 0.52 -0.0 119,120 + BWI76_RS00595 0.61 -2.2 119,151 - BWI76_RS00595 0.63 +0.8 119,242 - BWI76_RS00595 0.70 +0.2 119,259 - BWI76_RS00595 0.72 +0.8 119,274 + BWI76_RS00595 0.73 -1.5 119,435 + BWI76_RS00595 0.85 -0.6 119,482 - BWI76_RS00595 0.89 -1.8 119,850 - BWI76_RS00600 0.12 -1.5 119,890 - BWI76_RS00600 0.16 -6.4 120,058 - BWI76_RS00600 0.33 -5.1 120,072 - BWI76_RS00600 0.35 -3.2 120,072 - BWI76_RS00600 0.35 -4.4 120,118 - BWI76_RS00600 0.39 -4.4 120,418 - BWI76_RS00600 0.69 -4.6 120,613 + BWI76_RS00600 0.89 -4.3 121,130 + BWI76_RS00605 0.14 -1.2 121,201 + BWI76_RS00605 0.17 -1.4 121,222 + BWI76_RS00605 0.18 -0.4 121,230 - BWI76_RS00605 0.18 +0.4 121,284 + BWI76_RS00605 0.21 +0.0 121,458 + BWI76_RS00605 0.29 -1.0 121,644 - BWI76_RS00605 0.38 +0.1 121,654 - BWI76_RS00605 0.38 +0.2 121,720 + BWI76_RS00605 0.42 -1.1
Or see this region's nucleotide sequence