Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00520

Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI
104,765	-		BWI76_RS00510	0.71	+1.1
104,772	-		BWI76_RS00510	0.71	+1.5
104,796	-		BWI76_RS00510	0.73	+0.7
104,829	+				+0.4
105,106	+				+1.8
105,113	-				-0.5
105,124	-				+0.4
105,161	-		BWI76_RS00515	0.11	-1.0
105,201	+		BWI76_RS00515	0.19	+0.4
105,312	+		BWI76_RS00515	0.42	-0.2
105,444	-		BWI76_RS00515	0.70	-1.0
105,457	-		BWI76_RS00515	0.72	-0.9
105,512	-		BWI76_RS00515	0.84	+0.2
105,526	+		BWI76_RS00515	0.87	-0.6
105,614	-				+0.7
105,726	-				-0.7
105,734	-				-1.1
105,762	+				+0.3
105,762	+				-1.7
105,762	+				+0.6
105,763	+				-0.8
105,770	-				+0.4
105,770	-				+1.4
105,771	-				-1.1
105,771	-				+1.8
105,784	-				+0.5
105,855	+				+0.1
105,940	-				-0.2
106,051	+		BWI76_RS00520	0.11	+1.2
106,122	-		BWI76_RS00520	0.14	-0.0
106,149	-		BWI76_RS00520	0.15	-0.2
106,223	+		BWI76_RS00520	0.18	-1.0
106,223	+		BWI76_RS00520	0.18	-0.5
106,228	+		BWI76_RS00520	0.18	+0.5
106,231	-		BWI76_RS00520	0.18	+0.7
106,231	-		BWI76_RS00520	0.18	-3.1
106,231	-		BWI76_RS00520	0.18	-0.5
106,236	-		BWI76_RS00520	0.18	-0.1
106,241	+		BWI76_RS00520	0.18	-0.8
106,249	-		BWI76_RS00520	0.19	+0.4
106,288	-		BWI76_RS00520	0.20	-0.5
106,290	+		BWI76_RS00520	0.20	-0.2
106,298	-		BWI76_RS00520	0.20	-0.1
106,300	+		BWI76_RS00520	0.21	+0.7
106,332	+		BWI76_RS00520	0.22	+0.7
106,332	+		BWI76_RS00520	0.22	+0.6
106,481	+		BWI76_RS00520	0.27	-0.4
106,492	+		BWI76_RS00520	0.28	-0.0
106,500	-		BWI76_RS00520	0.28	-0.8
106,527	-		BWI76_RS00520	0.29	-1.0
106,551	+		BWI76_RS00520	0.30	-0.1
106,572	-		BWI76_RS00520	0.31	+4.1
106,609	+		BWI76_RS00520	0.32	+5.1
106,672	-		BWI76_RS00520	0.35	+0.2
106,743	+				+0.6
106,751	-		BWI76_RS00520	0.38	-0.6
106,800	-		BWI76_RS00520	0.40	+0.2
106,886	-		BWI76_RS00520	0.43	-0.1
107,023	+		BWI76_RS00520	0.48	+3.9
107,067	-		BWI76_RS00520	0.50	+0.3
107,117	+		BWI76_RS00520	0.52	+0.8
107,117	+		BWI76_RS00520	0.52	-1.3
107,156	-		BWI76_RS00520	0.53	-1.1
107,182	+		BWI76_RS00520	0.54	-1.2
107,242	-		BWI76_RS00520	0.57	+0.2
107,367	+		BWI76_RS00520	0.62	-1.6
107,406	+		BWI76_RS00520	0.63	+0.1
107,406	+		BWI76_RS00520	0.63	+1.7
107,450	+		BWI76_RS00520	0.65	+0.0
107,450	+		BWI76_RS00520	0.65	-0.1
107,450	+		BWI76_RS00520	0.65	-0.3
107,583	-		BWI76_RS00520	0.70	-0.3
107,617	+		BWI76_RS00520	0.71	-1.8
107,617	+		BWI76_RS00520	0.71	-1.1
107,625	-		BWI76_RS00520	0.71	-0.1
107,630	-		BWI76_RS00520	0.72	-0.3
107,667	+		BWI76_RS00520	0.73	-2.5
107,691	+		BWI76_RS00520	0.74	+0.4
107,756	-		BWI76_RS00520	0.76	+0.5
107,763	+		BWI76_RS00520	0.77	-0.8
107,771	-		BWI76_RS00520	0.77	-0.4
107,779	-		BWI76_RS00520	0.77	-0.9
107,812	-		BWI76_RS00520	0.79	-0.9
107,833	+		BWI76_RS00520	0.79	-0.8
107,846	-		BWI76_RS00520	0.80	+0.5
107,882	+		BWI76_RS00520	0.81	+1.5
107,903	-		BWI76_RS00520	0.82	-0.2
107,910	+		BWI76_RS00520	0.82	-1.1
107,916	-		BWI76_RS00520	0.83	+0.4
107,916	-		BWI76_RS00520	0.83	+0.0
107,960	-		BWI76_RS00520	0.84	-0.2
108,045	+		BWI76_RS00520	0.88	-0.9
108,045	+		BWI76_RS00520	0.88	+0.0
108,053	-		BWI76_RS00520	0.88	+1.0
108,053	-		BWI76_RS00520	0.88	+0.1
108,063	-		BWI76_RS00520	0.88	+1.4
108,073	+		BWI76_RS00520	0.89	+1.9
108,158	+				-1.7
108,163	+				+1.2
108,163	+				+0.5
108,166	-				+0.5
108,171	-				+0.1
108,171	-				-0.4
108,171	-				-0.5
108,171	-				+0.4
108,173	+				-1.4
108,173	+				-0.0
108,173	+				+0.8
108,181	-				+0.2
108,181	-				+0.1
108,181	-				+0.6
108,181	-				+1.2
108,181	-				+0.5
108,181	-				-0.6
108,240	-				-0.5
108,246	+				+2.6
108,247	-				+0.2
108,247	-				-0.2
108,254	+				-0.9
108,259	+				-1.0
108,259	+				-0.2
108,261	-				+4.3
108,262	-				+0.4
108,267	-				-1.3
108,274	-				-0.8
108,276	-				+1.2
108,278	-				-1.2
108,280	+				-0.2
108,283	-				+0.0
108,283	-				+0.2
108,285	+				+0.4
108,285	+				-0.8
108,285	+				-2.9
108,285	+				+0.0
108,285	+				-1.2
108,285	+				+1.4
108,285	+				-3.0
108,285	+				+0.3
108,285	+				+0.3
108,285	+				-0.9
108,285	+				-0.1
108,285	+				+0.6
108,285	+				-0.2
108,285	+				-0.4
108,285	+				-0.6
108,285	+				+1.0
108,285	+				+2.4
108,285	+				-0.1
108,285	+				+1.1
108,285	+				+0.2
108,285	+				-1.1
108,285	+				+1.4
108,285	+				-1.2
108,285	+				-1.8
108,285	+				-0.1
108,285	+				-1.8
108,285	+				-0.8
108,285	+				+0.1
108,285	+				+0.4
108,285	+				+0.0
108,285	+				-0.1
108,285	+				-0.9
108,285	+				+1.1
108,285	+				+0.3
108,285	+				+0.1
108,285	+				-0.2
108,285	+				-0.6
108,287	+				+0.6
108,288	-				-0.2
108,292	+				-0.8
108,292	+				-1.0
108,292	+				+0.0
108,292	+				-1.8
108,293	-				-0.1
108,293	-				-0.6
108,293	-				-1.0
108,293	-				+1.1
108,293	-				+0.1
108,293	-				-0.4
108,293	-				+0.3
108,293	-				-0.2
108,293	-				+0.4
108,293	-				-1.9
108,293	-				+1.1
108,293	-				+1.0
108,293	-				-0.6
108,293	-				-0.4
108,293	-				+0.4
108,293	-				+0.5
108,293	-				+0.8
108,293	-				+0.0
108,293	-				+1.0
108,293	-				-0.2
108,293	-				+0.4
108,293	-				+0.4
108,293	-				+0.6
108,293	-				+0.2
108,293	-				+0.3
108,293	-				-1.5
108,293	-				-1.0
108,293	-				+0.4
108,293	-				-2.1
108,293	-				+0.7
108,293	-				-0.4
108,293	-				-0.1
108,293	-				-0.1
108,293	-				-1.2
108,293	-				+1.2
108,293	-				-1.8
108,293	-				-0.1
108,293	-				-0.7
108,293	-				-1.3
108,293	-				+1.6
108,293	-				-0.2
108,293	-				+1.0
108,293	-				+1.2
108,293	-				+0.2
108,293	-				+1.3
108,293	-				+1.0
108,293	-				+0.6
108,293	-				-1.5
108,293	-				+0.1
108,300	+				-0.7
108,300	-				-0.1
108,300	-				+1.8
108,300	-				-0.9
108,300	-				+1.0
108,300	-				-0.0
108,300	-				+0.4
108,300	-				+0.3
108,300	-				-1.3
108,300	-				+0.2
108,300	-				-0.2
108,300	-				+0.0
108,302	-				+0.2
108,307	+				+0.0
108,307	+				-1.3
108,309	+				-0.2
108,315	-				-1.1
108,315	-				-1.4
108,315	-				-0.9
108,377	+				+0.4
108,377	+				+2.3
108,379	+				+1.0
108,385	-				+0.7
108,385	-				+0.9
108,385	-				+0.5
108,385	-				-0.4
108,385	-				+0.1
108,387	-				+0.3
108,390	-				+0.0
108,390	-				+1.2
108,397	-				+0.8
108,397	-				+0.1
108,397	-				+0.6
108,447	+				+0.3
108,524	-				-0.9
108,527	+				-1.0
108,527	+				-0.4
108,527	+				+0.4
108,542	-				-1.0
108,563	+				+0.4
108,563	+				-0.3
108,563	+				+0.3
108,566	+				+0.7
108,571	-				+1.0
108,571	-				+0.1
108,573	+				-0.4
108,573	+				+1.8
108,573	+				-1.0
108,573	+				+0.6
108,573	+				-0.8
108,573	+				+1.4
108,580	-				-0.0
108,581	-				+1.0
108,581	-				+0.3
108,581	-				-1.3
108,596	+				-0.5
108,596	+				-0.1
108,604	-				-1.3
108,604	-				-1.8
108,628	+				+0.4
108,628	+				+0.3
108,662	+		BWI76_RS00525	0.17	-1.4
108,663	-		BWI76_RS00525	0.17	-0.2
108,670	-		BWI76_RS00525	0.20	+0.6
108,685	-		BWI76_RS00525	0.27	-0.6
108,686	-		BWI76_RS00525	0.28	-0.6
108,714	-		BWI76_RS00525	0.41	-0.9
108,744	+		BWI76_RS00525	0.55	-1.0
108,754	-		BWI76_RS00525	0.59	-0.6
108,810	-		BWI76_RS00525	0.85	+1.8
108,813	+		BWI76_RS00525	0.87	-0.3
108,846	-				+0.9
108,850	-				-0.4
108,860	+				+1.1
108,867	+				-0.0
108,867	+				-0.4
108,867	+				+0.7
108,867	+				-0.7
108,867	+				-0.9
108,875	-				+0.0
108,875	-				-1.7
108,885	+				-0.3
108,894	+				-0.6
108,904	+				-0.2
108,910	-				-0.3
108,932	+				-0.4
108,991	+				-0.2
108,991	+				+2.6
108,991	+				-0.6
108,999	-				+1.8
108,999	-				+0.1
108,999	-				+0.3
109,048	+		BWI76_RS00530	0.13	-1.5
109,054	+		BWI76_RS00530	0.14	+0.3
109,060	+		BWI76_RS00530	0.15	-0.3
109,062	-		BWI76_RS00530	0.15	-0.1
109,065	+		BWI76_RS00530	0.15	-0.7
109,065	+		BWI76_RS00530	0.15	+0.3
109,065	+		BWI76_RS00530	0.15	+0.6
109,066	+		BWI76_RS00530	0.15	+0.0
109,068	-		BWI76_RS00530	0.15	+0.2
109,068	-		BWI76_RS00530	0.15	-0.2
109,068	-		BWI76_RS00530	0.15	-0.4
109,068	-		BWI76_RS00530	0.15	+0.2
109,068	-		BWI76_RS00530	0.15	-0.0
109,073	-		BWI76_RS00530	0.16	-0.1
109,073	-		BWI76_RS00530	0.16	+0.4
109,073	-		BWI76_RS00530	0.16	-0.3
109,073	-		BWI76_RS00530	0.16	+0.4
109,074	-		BWI76_RS00530	0.16	-0.7
109,092	+		BWI76_RS00530	0.18	+0.0
109,092	+		BWI76_RS00530	0.18	-0.9
109,092	+		BWI76_RS00530	0.18	-0.3
109,092	+		BWI76_RS00530	0.18	-0.7
109,092	+		BWI76_RS00530	0.18	+0.0
109,092	+		BWI76_RS00530	0.18	-0.9
109,092	+		BWI76_RS00530	0.18	-0.7
109,092	+		BWI76_RS00530	0.18	-0.3
109,092	+		BWI76_RS00530	0.18	-0.5
109,092	+		BWI76_RS00530	0.18	-0.6
109,092	+		BWI76_RS00530	0.18	+1.1
109,092	+		BWI76_RS00530	0.18	-0.2
109,092	+		BWI76_RS00530	0.18	+0.3
109,092	+		BWI76_RS00530	0.18	-0.1
109,100	-		BWI76_RS00530	0.19	-1.1
109,100	-		BWI76_RS00530	0.19	-0.2
109,100	-		BWI76_RS00530	0.19	+1.3
109,100	-		BWI76_RS00530	0.19	-0.7
109,100	-		BWI76_RS00530	0.19	-0.2
109,100	-		BWI76_RS00530	0.19	+0.1
109,100	-				-0.3
109,100	-		BWI76_RS00530	0.19	+1.2
109,100	-		BWI76_RS00530	0.19	+0.8
109,100	-		BWI76_RS00530	0.19	+1.2
109,100	-		BWI76_RS00530	0.19	-1.0
109,100	-				+3.9
109,100	-		BWI76_RS00530	0.19	-0.2
109,100	-		BWI76_RS00530	0.19	+0.1
109,102	+		BWI76_RS00530	0.19	+0.1
109,104	+		BWI76_RS00530	0.19	+0.6
109,110	+		BWI76_RS00530	0.20	+2.3
109,110	+		BWI76_RS00530	0.20	+0.8
109,110	+		BWI76_RS00530	0.20	+0.7
109,110	+		BWI76_RS00530	0.20	+0.8
109,110	+		BWI76_RS00530	0.20	-0.8
109,110	+		BWI76_RS00530	0.20	-1.5
109,113	-		BWI76_RS00530	0.20	+1.4
109,113	-		BWI76_RS00530	0.20	-0.9
109,118	-		BWI76_RS00530	0.20	+0.4
109,118	-		BWI76_RS00530	0.20	-0.3
109,118	-		BWI76_RS00530	0.20	+2.9
109,118	-		BWI76_RS00530	0.20	-1.1
109,118	-		BWI76_RS00530	0.20	-0.9
109,122	+		BWI76_RS00530	0.21	-0.1
109,125	+		BWI76_RS00530	0.21	-0.3
109,125	+		BWI76_RS00530	0.21	-0.4
109,125	+		BWI76_RS00530	0.21	+0.4
109,133	-		BWI76_RS00530	0.22	+0.9
109,133	-		BWI76_RS00530	0.22	+5.1
109,133	-		BWI76_RS00530	0.22	+1.3
109,182	+		BWI76_RS00530	0.27	-1.0
109,190	-		BWI76_RS00530	0.28	-0.7
109,195	+		BWI76_RS00530	0.28	-0.0
109,195	+		BWI76_RS00530	0.28	-0.4
109,195	+		BWI76_RS00530	0.28	+1.6
109,195	+		BWI76_RS00530	0.28	-0.3
109,203	-		BWI76_RS00530	0.29	+1.3
109,203	-		BWI76_RS00530	0.29	+0.5
109,203	-		BWI76_RS00530	0.29	-0.6
109,203	-		BWI76_RS00530	0.29	+1.2
109,212	+		BWI76_RS00530	0.30	-0.3
109,217	+		BWI76_RS00530	0.31	+0.0
109,236	-		BWI76_RS00530	0.33	+1.9
109,253	+		BWI76_RS00530	0.34	-0.3
109,260	+		BWI76_RS00530	0.35	-0.9
109,260	+		BWI76_RS00530	0.35	+0.2
109,260	+		BWI76_RS00530	0.35	-1.7
109,268	-		BWI76_RS00530	0.36	+0.2
109,271	+		BWI76_RS00530	0.36	-1.0
109,277	+		BWI76_RS00530	0.37	-1.4
109,279	-		BWI76_RS00530	0.37	-0.7
109,292	+		BWI76_RS00530	0.38	-1.0
109,292	+		BWI76_RS00530	0.38	-0.3
109,292	+		BWI76_RS00530	0.38	-0.0
109,292	+		BWI76_RS00530	0.38	+0.0
109,292	+		BWI76_RS00530	0.38	-0.3
109,292	+		BWI76_RS00530	0.38	-0.7
109,292	+		BWI76_RS00530	0.38	+2.9
109,292	+		BWI76_RS00530	0.38	-0.1
109,292	+		BWI76_RS00530	0.38	-0.2
109,294	+		BWI76_RS00530	0.38	+0.2
109,294	+		BWI76_RS00530	0.38	+1.4
109,297	-				-1.0
109,300	-		BWI76_RS00530	0.39	-1.2
109,300	-		BWI76_RS00530	0.39	+0.3
109,300	-		BWI76_RS00530	0.39	-0.4
109,300	-		BWI76_RS00530	0.39	+0.0
109,300	-		BWI76_RS00530	0.39	-0.3
109,300	-		BWI76_RS00530	0.39	-0.5
109,300	-		BWI76_RS00530	0.39	-0.9
109,300	-		BWI76_RS00530	0.39	+0.3
109,300	-		BWI76_RS00530	0.39	-0.1
109,300	-		BWI76_RS00530	0.39	-0.5
109,302	-		BWI76_RS00530	0.39	-0.1
109,302	-		BWI76_RS00530	0.39	+0.5
109,302	-		BWI76_RS00530	0.39	+1.9
109,302	-		BWI76_RS00530	0.39	+0.6
109,302	-		BWI76_RS00530	0.39	-0.5
109,304	+		BWI76_RS00530	0.39	+2.2
109,304	+		BWI76_RS00530	0.39	-1.1
109,307	-		BWI76_RS00530	0.40	+0.3
109,314	-		BWI76_RS00530	0.40	-1.8
109,337	-		BWI76_RS00530	0.43	-0.9
109,368	-		BWI76_RS00530	0.46	-0.4