Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07045 and BWI76_RS07050 are separated by 9 nucleotides BWI76_RS07050 and BWI76_RS07055 are separated by 10 nucleotides BWI76_RS07055 and BWI76_RS07060 are separated by 9 nucleotides
BWI76_RS07045: BWI76_RS07045 - acyl-CoA synthetase FdrA, at 1,481,676 to 1,483,343
_RS07045
BWI76_RS07050: BWI76_RS07050 - putative cytoplasmic protein, at 1,483,353 to 1,484,612
_RS07050
BWI76_RS07055: BWI76_RS07055 - putative cytoplasmic protein, at 1,484,623 to 1,485,426
_RS07055
BWI76_RS07060: BWI76_RS07060 - carbamate kinase, at 1,485,436 to 1,486,329
_RS07060
Position (kb)
1483
1484
1485 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1482.590 kb on + strand, within BWI76_RS07045 at 1482.645 kb on + strand, within BWI76_RS07045 at 1482.734 kb on + strand, within BWI76_RS07045 at 1482.775 kb on - strand, within BWI76_RS07045 at 1482.853 kb on + strand, within BWI76_RS07045 at 1483.151 kb on + strand, within BWI76_RS07045 at 1483.159 kb on - strand, within BWI76_RS07045 at 1483.222 kb on - strand at 1483.222 kb on - strand at 1483.224 kb on + strand at 1483.381 kb on - strand at 1483.478 kb on + strand at 1483.517 kb on - strand, within BWI76_RS07050 at 1483.523 kb on + strand, within BWI76_RS07050 at 1483.523 kb on + strand, within BWI76_RS07050 at 1483.615 kb on + strand, within BWI76_RS07050 at 1483.623 kb on - strand, within BWI76_RS07050 at 1483.709 kb on + strand, within BWI76_RS07050 at 1483.889 kb on - strand, within BWI76_RS07050 at 1483.924 kb on - strand, within BWI76_RS07050 at 1483.930 kb on + strand, within BWI76_RS07050 at 1484.028 kb on - strand, within BWI76_RS07050 at 1484.054 kb on + strand, within BWI76_RS07050 at 1484.115 kb on + strand, within BWI76_RS07050 at 1484.194 kb on - strand, within BWI76_RS07050 at 1484.211 kb on - strand at 1484.225 kb on - strand, within BWI76_RS07050 at 1484.226 kb on - strand, within BWI76_RS07050 at 1484.247 kb on - strand, within BWI76_RS07050 at 1484.473 kb on + strand, within BWI76_RS07050 at 1484.606 kb on + strand at 1484.693 kb on + strand at 1484.753 kb on + strand, within BWI76_RS07055 at 1484.761 kb on - strand, within BWI76_RS07055 at 1484.877 kb on + strand, within BWI76_RS07055 at 1485.024 kb on - strand, within BWI76_RS07055 at 1485.050 kb on + strand, within BWI76_RS07055 at 1485.056 kb on + strand, within BWI76_RS07055 at 1485.238 kb on + strand, within BWI76_RS07055 at 1485.246 kb on - strand, within BWI76_RS07055 at 1485.246 kb on - strand, within BWI76_RS07055 at 1485.485 kb on + strand at 1485.605 kb on - strand, within BWI76_RS07060
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 1,482,590 + BWI76_RS07045 0.55 +0.9 1,482,645 + BWI76_RS07045 0.58 -0.9 1,482,734 + BWI76_RS07045 0.63 +1.7 1,482,775 - BWI76_RS07045 0.66 -0.7 1,482,853 + BWI76_RS07045 0.71 -0.7 1,483,151 + BWI76_RS07045 0.88 +0.8 1,483,159 - BWI76_RS07045 0.89 -0.7 1,483,222 - +0.9 1,483,222 - -0.8 1,483,224 + +0.4 1,483,381 - -0.6 1,483,478 + -0.4 1,483,517 - BWI76_RS07050 0.13 +1.9 1,483,523 + BWI76_RS07050 0.13 -1.2 1,483,523 + BWI76_RS07050 0.13 -1.1 1,483,615 + BWI76_RS07050 0.21 -0.0 1,483,623 - BWI76_RS07050 0.21 +0.2 1,483,709 + BWI76_RS07050 0.28 -1.2 1,483,889 - BWI76_RS07050 0.43 -1.1 1,483,924 - BWI76_RS07050 0.45 +1.8 1,483,930 + BWI76_RS07050 0.46 -1.3 1,484,028 - BWI76_RS07050 0.54 -0.4 1,484,054 + BWI76_RS07050 0.56 -2.0 1,484,115 + BWI76_RS07050 0.60 -0.5 1,484,194 - BWI76_RS07050 0.67 -1.8 1,484,211 - -0.0 1,484,225 - BWI76_RS07050 0.69 +0.2 1,484,226 - BWI76_RS07050 0.69 -0.9 1,484,247 - BWI76_RS07050 0.71 -0.1 1,484,473 + BWI76_RS07050 0.89 -1.6 1,484,606 + +0.2 1,484,693 + +0.4 1,484,753 + BWI76_RS07055 0.16 -1.6 1,484,761 - BWI76_RS07055 0.17 +0.3 1,484,877 + BWI76_RS07055 0.32 -1.0 1,485,024 - BWI76_RS07055 0.50 +0.4 1,485,050 + BWI76_RS07055 0.53 -1.7 1,485,056 + BWI76_RS07055 0.54 +0.7 1,485,238 + BWI76_RS07055 0.76 -0.0 1,485,246 - BWI76_RS07055 0.77 +1.5 1,485,246 - BWI76_RS07055 0.77 +0.1 1,485,485 + -0.3 1,485,605 - BWI76_RS07060 0.19 -0.1
Or see this region's nucleotide sequence