Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22895 and BWI76_RS22900 are separated by 41 nucleotides BWI76_RS22900 and BWI76_RS22905 are separated by 271 nucleotides
BWI76_RS22895: BWI76_RS22895 - FAD-dependent oxidoreductase, at 4,778,223 to 4,779,620
_RS22895
BWI76_RS22900: BWI76_RS22900 - alkanesulfonate monooxygenase, at 4,779,662 to 4,780,834
_RS22900
BWI76_RS22905: BWI76_RS22905 - ATPase AAA, at 4,781,106 to 4,783,049
_RS22905
Position (kb) 4779
4780
4781 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4778.715 kb on - strand, within BWI76_RS22895 at 4778.925 kb on - strand, within BWI76_RS22895 at 4778.925 kb on - strand, within BWI76_RS22895 at 4778.985 kb on - strand, within BWI76_RS22895 at 4779.074 kb on - strand, within BWI76_RS22895 at 4779.079 kb on + strand, within BWI76_RS22895 at 4779.410 kb on + strand, within BWI76_RS22895 at 4779.446 kb on + strand, within BWI76_RS22895 at 4779.934 kb on - strand, within BWI76_RS22900 at 4779.940 kb on - strand, within BWI76_RS22900 at 4780.062 kb on + strand, within BWI76_RS22900 at 4780.229 kb on + strand, within BWI76_RS22900 at 4780.237 kb on - strand, within BWI76_RS22900 at 4780.247 kb on - strand, within BWI76_RS22900 at 4780.262 kb on + strand, within BWI76_RS22900 at 4780.305 kb on + strand, within BWI76_RS22900 at 4780.687 kb on + strand, within BWI76_RS22900 at 4780.688 kb on + strand, within BWI76_RS22900 at 4780.974 kb on + strand at 4781.052 kb on - strand at 4781.070 kb on + strand at 4781.076 kb on + strand at 4781.306 kb on - strand, within BWI76_RS22905 at 4781.379 kb on + strand, within BWI76_RS22905 at 4781.379 kb on + strand, within BWI76_RS22905 at 4781.387 kb on - strand, within BWI76_RS22905 at 4781.766 kb on + strand, within BWI76_RS22905 at 4781.798 kb on + strand at 4781.820 kb on + strand, within BWI76_RS22905 at 4781.828 kb on + strand, within BWI76_RS22905 at 4781.830 kb on + strand, within BWI76_RS22905
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 4,778,715 - BWI76_RS22895 0.35 -0.0 4,778,925 - BWI76_RS22895 0.50 -2.0 4,778,925 - BWI76_RS22895 0.50 -0.8 4,778,985 - BWI76_RS22895 0.55 +0.8 4,779,074 - BWI76_RS22895 0.61 -1.5 4,779,079 + BWI76_RS22895 0.61 -1.4 4,779,410 + BWI76_RS22895 0.85 -1.8 4,779,446 + BWI76_RS22895 0.87 -0.2 4,779,934 - BWI76_RS22900 0.23 -0.5 4,779,940 - BWI76_RS22900 0.24 +1.8 4,780,062 + BWI76_RS22900 0.34 +0.4 4,780,229 + BWI76_RS22900 0.48 -1.1 4,780,237 - BWI76_RS22900 0.49 +0.9 4,780,247 - BWI76_RS22900 0.50 -0.6 4,780,262 + BWI76_RS22900 0.51 +0.2 4,780,305 + BWI76_RS22900 0.55 -0.6 4,780,687 + BWI76_RS22900 0.87 +0.2 4,780,688 + BWI76_RS22900 0.87 -0.6 4,780,974 + -0.6 4,781,052 - -0.6 4,781,070 + +2.2 4,781,076 + +0.3 4,781,306 - BWI76_RS22905 0.10 -1.2 4,781,379 + BWI76_RS22905 0.14 +0.1 4,781,379 + BWI76_RS22905 0.14 +0.6 4,781,387 - BWI76_RS22905 0.14 +0.2 4,781,766 + BWI76_RS22905 0.34 -0.5 4,781,798 + +1.5 4,781,820 + BWI76_RS22905 0.37 -1.0 4,781,828 + BWI76_RS22905 0.37 +0.1 4,781,830 + BWI76_RS22905 0.37 +0.2
Or see this region's nucleotide sequence