Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27825 and BWI76_RS27830 are separated by 313 nucleotides BWI76_RS27830 and BWI76_RS27835 are separated by 70 nucleotides BWI76_RS27835 and BWI76_RS27840 are separated by 70 nucleotides BWI76_RS27840 and BWI76_RS27845 are separated by 177 nucleotides
BWI76_RS27825: BWI76_RS27825 - hypothetical protein, at 5,772,553 to 5,772,795
_RS27825
BWI76_RS27830: BWI76_RS27830 - type I toxin-antitoxin system toxin TisB, at 5,773,109 to 5,773,198
_RS27830
BWI76_RS27835: BWI76_RS27835 - acyltransferase, at 5,773,269 to 5,773,715
_RS27835
BWI76_RS27840: BWI76_RS27840 - putative membrane protein, transport, at 5,773,786 to 5,774,619
_RS27840
BWI76_RS27845: BWI76_RS27845 - multidrug transporter EmrD, at 5,774,797 to 5,775,981
_RS27845
Position (kb) 5773
5774
5775 Strain fitness (log2 ratio) -1
0
1
2
3
4
5 at 5772.795 kb on - strand at 5772.884 kb on - strand at 5773.054 kb on - strand at 5773.068 kb on - strand at 5773.130 kb on + strand, within BWI76_RS27830 at 5773.178 kb on + strand, within BWI76_RS27830 at 5773.178 kb on + strand, within BWI76_RS27830 at 5773.224 kb on - strand at 5773.305 kb on - strand at 5773.445 kb on - strand, within BWI76_RS27835 at 5773.488 kb on - strand, within BWI76_RS27835 at 5773.582 kb on - strand, within BWI76_RS27835 at 5773.677 kb on - strand at 5773.817 kb on + strand at 5773.898 kb on + strand, within BWI76_RS27840 at 5773.929 kb on + strand, within BWI76_RS27840 at 5773.951 kb on - strand, within BWI76_RS27840 at 5774.008 kb on - strand, within BWI76_RS27840 at 5774.029 kb on - strand, within BWI76_RS27840 at 5774.184 kb on - strand, within BWI76_RS27840 at 5774.195 kb on + strand, within BWI76_RS27840 at 5774.203 kb on - strand, within BWI76_RS27840 at 5774.256 kb on + strand, within BWI76_RS27840 at 5774.297 kb on + strand, within BWI76_RS27840 at 5774.303 kb on - strand, within BWI76_RS27840 at 5774.305 kb on - strand, within BWI76_RS27840 at 5774.343 kb on - strand, within BWI76_RS27840 at 5774.461 kb on + strand, within BWI76_RS27840 at 5774.773 kb on + strand at 5774.793 kb on - strand at 5774.976 kb on + strand, within BWI76_RS27845 at 5775.074 kb on + strand, within BWI76_RS27845 at 5775.109 kb on + strand, within BWI76_RS27845 at 5775.176 kb on - strand, within BWI76_RS27845 at 5775.181 kb on + strand, within BWI76_RS27845 at 5775.183 kb on + strand, within BWI76_RS27845 at 5775.183 kb on + strand, within BWI76_RS27845 at 5775.192 kb on + strand, within BWI76_RS27845 at 5775.200 kb on - strand, within BWI76_RS27845 at 5775.200 kb on - strand, within BWI76_RS27845 at 5775.268 kb on + strand, within BWI76_RS27845 at 5775.370 kb on + strand, within BWI76_RS27845 at 5775.378 kb on - strand, within BWI76_RS27845 at 5775.403 kb on - strand, within BWI76_RS27845 at 5775.513 kb on - strand, within BWI76_RS27845
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 5,772,795 - -0.6 5,772,884 - -0.6 5,773,054 - -0.4 5,773,068 - +0.2 5,773,130 + BWI76_RS27830 0.23 +0.5 5,773,178 + BWI76_RS27830 0.77 +0.0 5,773,178 + BWI76_RS27830 0.77 -1.0 5,773,224 - -0.0 5,773,305 - +1.0 5,773,445 - BWI76_RS27835 0.39 -0.2 5,773,488 - BWI76_RS27835 0.49 +1.4 5,773,582 - BWI76_RS27835 0.70 -0.2 5,773,677 - +0.6 5,773,817 + +0.6 5,773,898 + BWI76_RS27840 0.13 +3.3 5,773,929 + BWI76_RS27840 0.17 +0.5 5,773,951 - BWI76_RS27840 0.20 +1.3 5,774,008 - BWI76_RS27840 0.27 -0.4 5,774,029 - BWI76_RS27840 0.29 -0.2 5,774,184 - BWI76_RS27840 0.48 -0.5 5,774,195 + BWI76_RS27840 0.49 -0.4 5,774,203 - BWI76_RS27840 0.50 -1.0 5,774,256 + BWI76_RS27840 0.56 -0.4 5,774,297 + BWI76_RS27840 0.61 +0.1 5,774,303 - BWI76_RS27840 0.62 -0.1 5,774,305 - BWI76_RS27840 0.62 -0.2 5,774,343 - BWI76_RS27840 0.67 +5.4 5,774,461 + BWI76_RS27840 0.81 +1.1 5,774,773 + -0.6 5,774,793 - +2.0 5,774,976 + BWI76_RS27845 0.15 +0.0 5,775,074 + BWI76_RS27845 0.23 +0.4 5,775,109 + BWI76_RS27845 0.26 -0.3 5,775,176 - BWI76_RS27845 0.32 +0.3 5,775,181 + BWI76_RS27845 0.32 -1.4 5,775,183 + BWI76_RS27845 0.33 +0.6 5,775,183 + BWI76_RS27845 0.33 +0.1 5,775,192 + BWI76_RS27845 0.33 -1.5 5,775,200 - BWI76_RS27845 0.34 -0.5 5,775,200 - BWI76_RS27845 0.34 -0.2 5,775,268 + BWI76_RS27845 0.40 -0.1 5,775,370 + BWI76_RS27845 0.48 -0.8 5,775,378 - BWI76_RS27845 0.49 -0.3 5,775,403 - BWI76_RS27845 0.51 -1.1 5,775,513 - BWI76_RS27845 0.60 -1.0
Or see this region's nucleotide sequence