Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24365

Experiment: Parafilmed volatile agar plate with no fungus

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Parafilmed volatile agar plate with no fungus
5,077,049	-		BWI76_RS24360	0.27	+0.5
5,077,049	-		BWI76_RS24360	0.27	+0.6
5,077,049	-		BWI76_RS24360	0.27	-0.0
5,077,049	-		BWI76_RS24360	0.27	-0.7
5,077,049	-		BWI76_RS24360	0.27	-0.9
5,077,051	+		BWI76_RS24360	0.27	+0.7
5,077,051	+		BWI76_RS24360	0.27	-0.6
5,077,051	+		BWI76_RS24360	0.27	+0.6
5,077,059	-				+2.5
5,077,059	-		BWI76_RS24360	0.28	-0.9
5,077,059	-		BWI76_RS24360	0.28	-1.8
5,077,059	-		BWI76_RS24360	0.28	-1.1
5,077,059	-		BWI76_RS24360	0.28	+0.3
5,077,059	-		BWI76_RS24360	0.28	+1.0
5,077,059	-		BWI76_RS24360	0.28	-0.4
5,077,059	-		BWI76_RS24360	0.28	+1.5
5,077,059	-		BWI76_RS24360	0.28	-0.4
5,077,082	-		BWI76_RS24360	0.30	+0.2
5,077,086	-		BWI76_RS24360	0.30	+0.6
5,077,140	+		BWI76_RS24360	0.34	+0.7
5,077,169	-		BWI76_RS24360	0.37	-0.7
5,077,171	+		BWI76_RS24360	0.37	+1.3
5,077,174	-		BWI76_RS24360	0.37	+0.1
5,077,174	-		BWI76_RS24360	0.37	-0.3
5,077,179	-		BWI76_RS24360	0.37	+1.7
5,077,210	-		BWI76_RS24360	0.40	+0.2
5,077,211	-		BWI76_RS24360	0.40	+1.3
5,077,213	-		BWI76_RS24360	0.40	+0.4
5,077,255	-		BWI76_RS24360	0.43	-0.5
5,077,263	+		BWI76_RS24360	0.44	-2.1
5,077,273	+		BWI76_RS24360	0.45	+0.7
5,077,279	+		BWI76_RS24360	0.45	+0.6
5,077,288	+		BWI76_RS24360	0.46	-0.4
5,077,288	+		BWI76_RS24360	0.46	-0.2
5,077,288	+		BWI76_RS24360	0.46	-0.5
5,077,292	-				+0.7
5,077,296	-		BWI76_RS24360	0.47	+0.1
5,077,296	-		BWI76_RS24360	0.47	-0.5
5,077,296	-		BWI76_RS24360	0.47	-0.4
5,077,296	-		BWI76_RS24360	0.47	-0.2
5,077,296	-		BWI76_RS24360	0.47	-0.4
5,077,320	+		BWI76_RS24360	0.49	-0.6
5,077,329	+		BWI76_RS24360	0.49	-0.6
5,077,336	-		BWI76_RS24360	0.50	-0.9
5,077,336	-		BWI76_RS24360	0.50	+0.6
5,077,407	-		BWI76_RS24360	0.55	+0.6
5,077,439	-		BWI76_RS24360	0.58	-0.1
5,077,442	-				+0.3
5,077,443	-		BWI76_RS24360	0.58	+1.3
5,077,443	-		BWI76_RS24360	0.58	-0.6
5,077,443	-		BWI76_RS24360	0.58	+0.3
5,077,443	-		BWI76_RS24360	0.58	+0.1
5,077,448	-				-0.9
5,077,457	+		BWI76_RS24360	0.59	-1.3
5,077,457	+		BWI76_RS24360	0.59	+0.1
5,077,458	-		BWI76_RS24360	0.59	+0.5
5,077,465	-		BWI76_RS24360	0.60	-0.4
5,077,467	+		BWI76_RS24360	0.60	-0.3
5,077,475	-		BWI76_RS24360	0.61	-0.6
5,077,475	-		BWI76_RS24360	0.61	+0.6
5,077,489	-		BWI76_RS24360	0.62	-0.5
5,077,489	-				+0.7
5,077,494	-		BWI76_RS24360	0.62	-0.2
5,077,494	-		BWI76_RS24360	0.62	-1.5
5,077,498	-		BWI76_RS24360	0.63	-0.6
5,077,499	-		BWI76_RS24360	0.63	+0.4
5,077,512	+		BWI76_RS24360	0.64	-0.0
5,077,512	+		BWI76_RS24360	0.64	+0.7
5,077,520	-		BWI76_RS24360	0.64	+0.5
5,077,530	-		BWI76_RS24360	0.65	+2.1
5,077,556	+		BWI76_RS24360	0.67	+0.1
5,077,564	-		BWI76_RS24360	0.68	+0.1
5,077,564	-		BWI76_RS24360	0.68	-0.0
5,077,564	-				+1.0
5,077,564	-		BWI76_RS24360	0.68	-0.9
5,077,574	-		BWI76_RS24360	0.69	+0.1
5,077,574	-		BWI76_RS24360	0.69	+0.2
5,077,574	-		BWI76_RS24360	0.69	+1.4
5,077,578	+		BWI76_RS24360	0.69	+1.4
5,077,578	+		BWI76_RS24360	0.69	-0.6
5,077,578	+		BWI76_RS24360	0.69	-0.2
5,077,578	+		BWI76_RS24360	0.69	-0.5
5,077,578	+		BWI76_RS24360	0.69	+0.6
5,077,578	+		BWI76_RS24360	0.69	-0.4
5,077,578	+		BWI76_RS24360	0.69	+0.4
5,077,578	+		BWI76_RS24360	0.69	+0.6
5,077,578	+		BWI76_RS24360	0.69	-0.0
5,077,578	+		BWI76_RS24360	0.69	-0.1
5,077,578	+		BWI76_RS24360	0.69	+0.0
5,077,586	-		BWI76_RS24360	0.70	-0.3
5,077,586	-		BWI76_RS24360	0.70	-0.8
5,077,586	-		BWI76_RS24360	0.70	+0.9
5,077,586	-		BWI76_RS24360	0.70	+0.2
5,077,586	-		BWI76_RS24360	0.70	-0.8
5,077,586	-		BWI76_RS24360	0.70	-0.0
5,077,586	-		BWI76_RS24360	0.70	+0.2
5,077,586	-		BWI76_RS24360	0.70	-1.2
5,077,586	-		BWI76_RS24360	0.70	+1.4
5,077,586	-		BWI76_RS24360	0.70	-0.1
5,077,586	-		BWI76_RS24360	0.70	-0.3
5,077,586	-		BWI76_RS24360	0.70	+0.1
5,077,586	-		BWI76_RS24360	0.70	+0.8
5,077,639	+		BWI76_RS24360	0.74	+1.1
5,077,647	-		BWI76_RS24360	0.74	-0.8
5,077,659	-		BWI76_RS24360	0.75	+1.1
5,077,664	-		BWI76_RS24360	0.76	-0.4
5,077,667	+		BWI76_RS24360	0.76	-1.2
5,077,669	-		BWI76_RS24360	0.76	+1.0
5,077,677	-		BWI76_RS24360	0.77	-0.2
5,077,723	+		BWI76_RS24360	0.80	+0.6
5,077,723	-		BWI76_RS24360	0.80	+0.7
5,077,728	+		BWI76_RS24360	0.81	+0.2
5,077,731	-		BWI76_RS24360	0.81	+0.6
5,077,736	-		BWI76_RS24360	0.81	-2.2
5,077,738	-		BWI76_RS24360	0.81	+1.4
5,077,765	+		BWI76_RS24360	0.84	-0.7
5,077,826	+		BWI76_RS24360	0.88	-1.0
5,077,834	-		BWI76_RS24360	0.89	-0.5
5,077,859	+				+1.3
5,077,864	+				+0.7
5,077,866	-				+2.7
5,077,872	-				+2.5
5,077,873	-				+0.7
5,077,877	-				-0.6
5,077,879	+				-0.7
5,077,879	+				-1.1
5,077,879	+				-0.4
5,077,887	-				+0.0
5,077,887	-				+1.9
5,077,887	-				+0.6
5,077,887	-				+0.5
5,077,957	+				-1.6
5,077,976	+				+1.4
5,077,976	+				-0.3
5,077,981	-				-1.2
5,077,984	-				+0.9
5,078,019	-				-0.9
5,078,021	+				+0.1
5,078,021	+				-0.4
5,078,021	+				-0.5
5,078,021	+				-0.4
5,078,024	-				-1.0
5,078,024	-				-0.2
5,078,029	-				-0.4
5,078,029	-				-1.1
5,078,029	-				-1.7
5,078,029	-				-0.6
5,078,029	-				-0.5
5,078,029	-				-1.7
5,078,029	-				-0.1
5,078,029	-				-0.0
5,078,100	+				-0.2
5,078,108	-				+1.3
5,078,109	+				+0.4
5,078,116	-				-1.2
5,078,116	-				-0.4
5,078,116	-				+0.8
5,078,150	+				-0.9
5,078,150	+				-0.2
5,078,150	+				-0.4
5,078,150	+				+0.3
5,078,155	+				+0.0
5,078,158	+				-2.0
5,078,158	-				-0.2
5,078,158	-				-0.6
5,078,158	-				+0.6
5,078,158	-				-0.5
5,078,163	-				-0.5
5,078,165	+				-0.0
5,078,165	+				+0.8
5,078,165	+				+0.3
5,078,165	+				+1.5
5,078,166	-				-0.2
5,078,171	-				-0.2
5,078,173	-				+1.0
5,078,173	-				-0.0
5,078,173	-				-0.3
5,078,173	-				+0.8
5,078,188	-				-0.0
5,078,206	-				-1.1
5,078,212	+				-1.1
5,078,239	-		BWI76_RS24365	0.11	-0.5
5,078,240	+		BWI76_RS24365	0.11	+1.9
5,078,243	+		BWI76_RS24365	0.11	-0.3
5,078,248	-		BWI76_RS24365	0.11	-0.1
5,078,262	+		BWI76_RS24365	0.12	-0.5
5,078,280	-		BWI76_RS24365	0.13	+0.0
5,078,280	-		BWI76_RS24365	0.13	-1.1
5,078,309	+		BWI76_RS24365	0.15	-0.6
5,078,312	-		BWI76_RS24365	0.15	+1.0
5,078,319	-		BWI76_RS24365	0.15	-0.5
5,078,326	+		BWI76_RS24365	0.16	-0.4
5,078,344	-		BWI76_RS24365	0.17	+1.1
5,078,349	+		BWI76_RS24365	0.17	-0.0
5,078,362	-		BWI76_RS24365	0.18	+0.6
5,078,378	+		BWI76_RS24365	0.19	-0.6
5,078,399	-		BWI76_RS24365	0.20	+1.4
5,078,459	+		BWI76_RS24365	0.23	+1.4
5,078,599	+		BWI76_RS24365	0.31	-0.2
5,078,605	+		BWI76_RS24365	0.31	-1.8
5,078,607	-		BWI76_RS24365	0.31	-1.3
5,078,607	-		BWI76_RS24365	0.31	-0.6
5,078,607	-		BWI76_RS24365	0.31	-0.1
5,078,617	-		BWI76_RS24365	0.32	-0.7
5,078,771	-		BWI76_RS24365	0.40	+0.4
5,078,771	-		BWI76_RS24365	0.40	+0.6
5,078,883	-		BWI76_RS24365	0.46	+0.4
5,079,103	-		BWI76_RS24365	0.58	-0.1
5,079,210	+				+0.5
5,079,210	+		BWI76_RS24365	0.64	-0.0
5,079,217	-		BWI76_RS24365	0.65	+1.2
5,079,289	-		BWI76_RS24365	0.69	+5.3
5,079,365	+		BWI76_RS24365	0.73	-0.4
5,079,508	-		BWI76_RS24365	0.81	-0.3
5,079,514	-		BWI76_RS24365	0.81	+0.0
5,079,567	+		BWI76_RS24365	0.84	+4.3
5,079,567	+		BWI76_RS24365	0.84	-0.6
5,079,567	+		BWI76_RS24365	0.84	-0.4
5,079,575	-		BWI76_RS24365	0.84	+0.6
5,079,691	-				-1.8
5,079,732	+				+0.2
5,079,749	+				-0.4
5,079,759	+				-1.3
5,079,799	-				-0.5
5,079,809	-				+0.0
5,079,859	+				-0.2
5,079,864	+				-1.6
5,079,889	+				-0.3
5,080,050	+				+0.2
5,080,067	-				-2.6
5,080,072	-				-0.2
5,080,116	+		BWI76_RS24370	0.11	-1.3
5,080,157	+		BWI76_RS24370	0.15	-1.3
5,080,192	+		BWI76_RS24370	0.20	-1.2
5,080,339	+		BWI76_RS24370	0.37	+0.5
5,080,344	+		BWI76_RS24370	0.37	-1.6
5,080,387	+		BWI76_RS24370	0.42	+1.6
5,080,616	-		BWI76_RS24370	0.69	+1.3
5,080,767	-		BWI76_RS24370	0.87	+0.4