Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19255 and BWI76_RS19260 are separated by 0 nucleotides BWI76_RS19260 and BWI76_RS19265 are separated by 1 nucleotides
BWI76_RS19255: BWI76_RS19255 - multidrug transporter subunit MdtB, at 4,006,342 to 4,009,464
_RS19255
BWI76_RS19260: BWI76_RS19260 - multidrug transporter subunit MdtC, at 4,009,465 to 4,012,542
_RS19260
BWI76_RS19265: BWI76_RS19265 - multidrug transporter subunit MdtD, at 4,012,544 to 4,013,959
_RS19265
Position (kb)
4009
4010
4011
4012
4013 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 4008.564 kb on + strand, within BWI76_RS19255 at 4008.643 kb on + strand, within BWI76_RS19255 at 4008.815 kb on + strand, within BWI76_RS19255 at 4009.196 kb on - strand at 4009.196 kb on - strand at 4009.531 kb on - strand at 4009.541 kb on - strand at 4009.797 kb on + strand, within BWI76_RS19260 at 4009.856 kb on + strand, within BWI76_RS19260 at 4009.966 kb on - strand, within BWI76_RS19260 at 4010.021 kb on + strand at 4010.422 kb on + strand, within BWI76_RS19260 at 4010.430 kb on - strand, within BWI76_RS19260 at 4010.509 kb on - strand, within BWI76_RS19260 at 4010.513 kb on + strand, within BWI76_RS19260 at 4010.599 kb on - strand, within BWI76_RS19260 at 4010.685 kb on + strand, within BWI76_RS19260 at 4010.704 kb on + strand, within BWI76_RS19260 at 4011.061 kb on - strand, within BWI76_RS19260 at 4011.383 kb on - strand, within BWI76_RS19260 at 4011.458 kb on - strand, within BWI76_RS19260 at 4011.553 kb on + strand, within BWI76_RS19260 at 4011.878 kb on + strand, within BWI76_RS19260 at 4012.058 kb on - strand, within BWI76_RS19260 at 4012.059 kb on - strand, within BWI76_RS19260 at 4012.072 kb on + strand, within BWI76_RS19260 at 4012.108 kb on - strand, within BWI76_RS19260 at 4012.198 kb on - strand, within BWI76_RS19260 at 4012.260 kb on + strand at 4012.597 kb on - strand at 4012.755 kb on + strand, within BWI76_RS19265 at 4012.763 kb on - strand, within BWI76_RS19265 at 4012.795 kb on + strand at 4012.850 kb on - strand, within BWI76_RS19265 at 4012.944 kb on - strand, within BWI76_RS19265 at 4013.012 kb on + strand, within BWI76_RS19265 at 4013.429 kb on - strand, within BWI76_RS19265
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 4,008,564 + BWI76_RS19255 0.71 +1.8 4,008,643 + BWI76_RS19255 0.74 -0.2 4,008,815 + BWI76_RS19255 0.79 -0.3 4,009,196 - -0.5 4,009,196 - +0.6 4,009,531 - -0.2 4,009,541 - -2.5 4,009,797 + BWI76_RS19260 0.11 -0.3 4,009,856 + BWI76_RS19260 0.13 +0.0 4,009,966 - BWI76_RS19260 0.16 -0.1 4,010,021 + +0.4 4,010,422 + BWI76_RS19260 0.31 -0.7 4,010,430 - BWI76_RS19260 0.31 +6.8 4,010,509 - BWI76_RS19260 0.34 -0.5 4,010,513 + BWI76_RS19260 0.34 -0.2 4,010,599 - BWI76_RS19260 0.37 -2.4 4,010,685 + BWI76_RS19260 0.40 +4.7 4,010,704 + BWI76_RS19260 0.40 +0.4 4,011,061 - BWI76_RS19260 0.52 +0.0 4,011,383 - BWI76_RS19260 0.62 -0.1 4,011,458 - BWI76_RS19260 0.65 -0.1 4,011,553 + BWI76_RS19260 0.68 -0.6 4,011,878 + BWI76_RS19260 0.78 +0.0 4,012,058 - BWI76_RS19260 0.84 -0.1 4,012,059 - BWI76_RS19260 0.84 -0.3 4,012,072 + BWI76_RS19260 0.85 -1.3 4,012,108 - BWI76_RS19260 0.86 +0.3 4,012,198 - BWI76_RS19260 0.89 +0.7 4,012,260 + -0.5 4,012,597 - +0.7 4,012,755 + BWI76_RS19265 0.15 -0.1 4,012,763 - BWI76_RS19265 0.15 -0.4 4,012,795 + -0.2 4,012,850 - BWI76_RS19265 0.22 -0.4 4,012,944 - BWI76_RS19265 0.28 +0.7 4,013,012 + BWI76_RS19265 0.33 -0.1 4,013,429 - BWI76_RS19265 0.62 +3.0
Or see this region's nucleotide sequence