Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06965 and BWI76_RS06970 are separated by 106 nucleotides BWI76_RS06970 and BWI76_RS06975 are separated by 87 nucleotides
BWI76_RS06965: BWI76_RS06965 - membrane protein, at 1,462,636 to 1,463,781
_RS06965
BWI76_RS06970: BWI76_RS06970 - selenophosphate-dependent tRNA 2-selenouridine synthase, at 1,463,888 to 1,464,973
_RS06970
BWI76_RS06975: BWI76_RS06975 - DNA-binding transcriptional activator AllS, at 1,465,061 to 1,465,984
_RS06975
Position (kb)
1463
1464
1465 Strain fitness (log2 ratio)
-1
0
1 at 1462.891 kb on - strand, within BWI76_RS06965 at 1462.938 kb on - strand, within BWI76_RS06965 at 1462.991 kb on - strand, within BWI76_RS06965 at 1463.012 kb on - strand, within BWI76_RS06965 at 1463.012 kb on - strand, within BWI76_RS06965 at 1463.061 kb on - strand, within BWI76_RS06965 at 1463.422 kb on + strand, within BWI76_RS06965 at 1463.685 kb on + strand at 1463.775 kb on + strand at 1463.810 kb on + strand at 1463.873 kb on - strand at 1463.889 kb on - strand at 1464.424 kb on + strand, within BWI76_RS06970 at 1464.550 kb on - strand, within BWI76_RS06970 at 1464.601 kb on + strand, within BWI76_RS06970 at 1464.622 kb on - strand, within BWI76_RS06970 at 1464.637 kb on - strand, within BWI76_RS06970 at 1464.846 kb on + strand, within BWI76_RS06970 at 1464.925 kb on + strand at 1464.982 kb on + strand at 1465.048 kb on - strand at 1465.074 kb on - strand at 1465.141 kb on - strand at 1465.143 kb on + strand at 1465.208 kb on - strand, within BWI76_RS06975 at 1465.347 kb on + strand, within BWI76_RS06975 at 1465.372 kb on + strand, within BWI76_RS06975 at 1465.542 kb on - strand, within BWI76_RS06975 at 1465.646 kb on + strand, within BWI76_RS06975 at 1465.925 kb on + strand at 1465.928 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 1,462,891 - BWI76_RS06965 0.22 -0.1 1,462,938 - BWI76_RS06965 0.26 +0.0 1,462,991 - BWI76_RS06965 0.31 -0.5 1,463,012 - BWI76_RS06965 0.33 -0.6 1,463,012 - BWI76_RS06965 0.33 -0.6 1,463,061 - BWI76_RS06965 0.37 -0.1 1,463,422 + BWI76_RS06965 0.69 +0.2 1,463,685 + -1.0 1,463,775 + +0.6 1,463,810 + +0.5 1,463,873 - +0.5 1,463,889 - -0.3 1,464,424 + BWI76_RS06970 0.49 -0.4 1,464,550 - BWI76_RS06970 0.61 +0.2 1,464,601 + BWI76_RS06970 0.66 -0.8 1,464,622 - BWI76_RS06970 0.68 -1.7 1,464,637 - BWI76_RS06970 0.69 -1.5 1,464,846 + BWI76_RS06970 0.88 -0.4 1,464,925 + -0.1 1,464,982 + +0.1 1,465,048 - -0.6 1,465,074 - +0.1 1,465,141 - -1.2 1,465,143 + +0.3 1,465,208 - BWI76_RS06975 0.16 +0.0 1,465,347 + BWI76_RS06975 0.31 -0.3 1,465,372 + BWI76_RS06975 0.34 +0.3 1,465,542 - BWI76_RS06975 0.52 -0.8 1,465,646 + BWI76_RS06975 0.63 +0.0 1,465,925 + +0.0 1,465,928 - -0.3
Or see this region's nucleotide sequence