Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03755 and BWI76_RS03760 overlap by 1 nucleotides BWI76_RS03760 and BWI76_RS03765 are separated by 10 nucleotides BWI76_RS03765 and BWI76_RS03770 are separated by 163 nucleotides
BWI76_RS03755: BWI76_RS03755 - phosphoadenosine phosphosulfate reductase, at 777,414 to 778,625
_RS03755
BWI76_RS03760: BWI76_RS03760 - hypothetical protein, at 778,625 to 779,251
_RS03760
BWI76_RS03765: BWI76_RS03765 - MFS transporter, at 779,262 to 780,503
_RS03765
BWI76_RS03770: BWI76_RS03770 - DUF445 domain-containing protein, at 780,667 to 781,956
_RS03770
Position (kb) 779
780
781 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6 at 778.279 kb on + strand, within BWI76_RS03755 at 778.287 kb on - strand, within BWI76_RS03755 at 778.559 kb on + strand at 778.566 kb on - strand at 778.568 kb on - strand at 778.576 kb on - strand at 778.627 kb on - strand at 778.724 kb on - strand, within BWI76_RS03760 at 778.806 kb on + strand, within BWI76_RS03760 at 778.806 kb on + strand, within BWI76_RS03760 at 778.814 kb on - strand, within BWI76_RS03760 at 778.874 kb on - strand, within BWI76_RS03760 at 778.933 kb on + strand, within BWI76_RS03760 at 778.973 kb on + strand, within BWI76_RS03760 at 779.072 kb on + strand, within BWI76_RS03760 at 779.121 kb on + strand, within BWI76_RS03760 at 779.242 kb on - strand at 779.622 kb on + strand, within BWI76_RS03765 at 779.688 kb on - strand, within BWI76_RS03765 at 779.695 kb on - strand, within BWI76_RS03765 at 779.877 kb on + strand, within BWI76_RS03765 at 779.908 kb on - strand, within BWI76_RS03765 at 780.009 kb on + strand, within BWI76_RS03765 at 780.017 kb on - strand, within BWI76_RS03765 at 780.151 kb on + strand, within BWI76_RS03765 at 780.180 kb on + strand, within BWI76_RS03765 at 780.180 kb on + strand, within BWI76_RS03765 at 780.224 kb on + strand, within BWI76_RS03765 at 780.224 kb on + strand, within BWI76_RS03765 at 780.232 kb on - strand, within BWI76_RS03765 at 780.241 kb on + strand, within BWI76_RS03765 at 780.251 kb on + strand, within BWI76_RS03765 at 780.316 kb on + strand, within BWI76_RS03765 at 780.374 kb on - strand, within BWI76_RS03765 at 780.582 kb on + strand at 780.722 kb on - strand at 780.739 kb on - strand at 780.942 kb on - strand, within BWI76_RS03770 at 781.159 kb on + strand, within BWI76_RS03770 at 781.165 kb on + strand, within BWI76_RS03770 at 781.184 kb on + strand, within BWI76_RS03770 at 781.221 kb on - strand, within BWI76_RS03770 at 781.273 kb on - strand, within BWI76_RS03770 at 781.349 kb on + strand, within BWI76_RS03770 at 781.414 kb on + strand, within BWI76_RS03770 at 781.477 kb on - strand, within BWI76_RS03770 at 781.489 kb on - strand, within BWI76_RS03770
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 778,279 + BWI76_RS03755 0.71 -0.3 778,287 - BWI76_RS03755 0.72 -0.5 778,559 + -0.0 778,566 - +1.5 778,568 - +0.5 778,576 - -0.5 778,627 - +1.7 778,724 - BWI76_RS03760 0.16 +0.3 778,806 + BWI76_RS03760 0.29 -0.3 778,806 + BWI76_RS03760 0.29 -0.8 778,814 - BWI76_RS03760 0.30 -0.4 778,874 - BWI76_RS03760 0.40 +1.0 778,933 + BWI76_RS03760 0.49 -0.4 778,973 + BWI76_RS03760 0.56 -0.8 779,072 + BWI76_RS03760 0.71 -0.7 779,121 + BWI76_RS03760 0.79 -0.6 779,242 - -0.1 779,622 + BWI76_RS03765 0.29 -0.1 779,688 - BWI76_RS03765 0.34 -0.8 779,695 - BWI76_RS03765 0.35 -0.7 779,877 + BWI76_RS03765 0.50 -0.0 779,908 - BWI76_RS03765 0.52 +0.2 780,009 + BWI76_RS03765 0.60 +6.3 780,017 - BWI76_RS03765 0.61 -0.4 780,151 + BWI76_RS03765 0.72 +2.3 780,180 + BWI76_RS03765 0.74 -0.9 780,180 + BWI76_RS03765 0.74 +0.5 780,224 + BWI76_RS03765 0.77 -0.2 780,224 + BWI76_RS03765 0.77 -0.7 780,232 - BWI76_RS03765 0.78 +0.2 780,241 + BWI76_RS03765 0.79 -0.4 780,251 + BWI76_RS03765 0.80 +1.0 780,316 + BWI76_RS03765 0.85 -0.1 780,374 - BWI76_RS03765 0.90 +3.7 780,582 + +0.0 780,722 - -0.0 780,739 - +0.4 780,942 - BWI76_RS03770 0.21 +0.3 781,159 + BWI76_RS03770 0.38 +1.7 781,165 + BWI76_RS03770 0.39 -1.1 781,184 + BWI76_RS03770 0.40 -1.2 781,221 - BWI76_RS03770 0.43 +0.7 781,273 - BWI76_RS03770 0.47 +0.1 781,349 + BWI76_RS03770 0.53 +0.5 781,414 + BWI76_RS03770 0.58 -0.5 781,477 - BWI76_RS03770 0.63 +0.1 781,489 - BWI76_RS03770 0.64 -0.2
Or see this region's nucleotide sequence