Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03105 and BWI76_RS03110 are separated by 168 nucleotides BWI76_RS03110 and BWI76_RS03115 are separated by 172 nucleotides
BWI76_RS03105: BWI76_RS03105 - myo-inosose-2 dehydratase, at 639,132 to 640,031
_RS03105
BWI76_RS03110: BWI76_RS03110 - MFS transporter, at 640,200 to 641,699
_RS03110
BWI76_RS03115: BWI76_RS03115 - ABC transporter substrate-binding protein, at 641,872 to 643,182
_RS03115
Position (kb) 640
641
642 Strain fitness (log2 ratio) -2
-1
0
1 at 639.214 kb on - strand at 639.769 kb on - strand, within BWI76_RS03105 at 640.112 kb on - strand at 640.133 kb on + strand at 640.141 kb on - strand at 640.191 kb on - strand at 640.247 kb on - strand at 640.352 kb on - strand, within BWI76_RS03110 at 640.388 kb on - strand, within BWI76_RS03110 at 640.447 kb on - strand, within BWI76_RS03110 at 640.660 kb on - strand, within BWI76_RS03110 at 640.894 kb on - strand, within BWI76_RS03110 at 640.981 kb on - strand, within BWI76_RS03110 at 641.008 kb on - strand, within BWI76_RS03110 at 641.063 kb on - strand, within BWI76_RS03110 at 641.076 kb on + strand, within BWI76_RS03110 at 641.076 kb on + strand, within BWI76_RS03110 at 641.076 kb on + strand, within BWI76_RS03110 at 641.084 kb on - strand, within BWI76_RS03110 at 641.153 kb on - strand, within BWI76_RS03110 at 641.313 kb on - strand, within BWI76_RS03110 at 641.494 kb on + strand, within BWI76_RS03110 at 641.585 kb on + strand at 641.694 kb on + strand at 641.702 kb on - strand at 641.702 kb on - strand at 641.702 kb on - strand at 641.702 kb on - strand at 641.724 kb on + strand at 641.802 kb on + strand at 642.018 kb on + strand, within BWI76_RS03115 at 642.064 kb on - strand, within BWI76_RS03115 at 642.075 kb on + strand, within BWI76_RS03115 at 642.093 kb on - strand, within BWI76_RS03115 at 642.134 kb on + strand, within BWI76_RS03115 at 642.246 kb on + strand, within BWI76_RS03115 at 642.254 kb on - strand, within BWI76_RS03115 at 642.264 kb on - strand, within BWI76_RS03115 at 642.365 kb on + strand, within BWI76_RS03115 at 642.570 kb on - strand, within BWI76_RS03115 at 642.648 kb on + strand, within BWI76_RS03115 at 642.687 kb on - strand, within BWI76_RS03115
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 639,214 - -0.2 639,769 - BWI76_RS03105 0.71 +0.9 640,112 - -0.2 640,133 + -0.6 640,141 - +1.3 640,191 - +1.2 640,247 - +0.6 640,352 - BWI76_RS03110 0.10 +0.2 640,388 - BWI76_RS03110 0.13 -0.3 640,447 - BWI76_RS03110 0.16 +0.7 640,660 - BWI76_RS03110 0.31 -0.2 640,894 - BWI76_RS03110 0.46 -0.2 640,981 - BWI76_RS03110 0.52 -0.5 641,008 - BWI76_RS03110 0.54 -0.7 641,063 - BWI76_RS03110 0.58 +0.0 641,076 + BWI76_RS03110 0.58 -0.5 641,076 + BWI76_RS03110 0.58 -1.9 641,076 + BWI76_RS03110 0.58 -0.4 641,084 - BWI76_RS03110 0.59 +0.0 641,153 - BWI76_RS03110 0.64 -0.5 641,313 - BWI76_RS03110 0.74 +0.4 641,494 + BWI76_RS03110 0.86 -1.0 641,585 + +1.6 641,694 + -0.2 641,702 - -0.1 641,702 - -0.6 641,702 - +0.3 641,702 - -0.2 641,724 + -0.9 641,802 + +0.1 642,018 + BWI76_RS03115 0.11 -0.5 642,064 - BWI76_RS03115 0.15 -0.1 642,075 + BWI76_RS03115 0.15 -0.4 642,093 - BWI76_RS03115 0.17 +0.1 642,134 + BWI76_RS03115 0.20 +1.5 642,246 + BWI76_RS03115 0.29 +0.2 642,254 - BWI76_RS03115 0.29 +0.4 642,264 - BWI76_RS03115 0.30 +0.2 642,365 + BWI76_RS03115 0.38 +1.2 642,570 - BWI76_RS03115 0.53 -1.1 642,648 + BWI76_RS03115 0.59 -0.8 642,687 - BWI76_RS03115 0.62 -1.2
Or see this region's nucleotide sequence