Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02970 and BWI76_RS02975 are separated by 37 nucleotides BWI76_RS02975 and BWI76_RS02980 are separated by 145 nucleotides BWI76_RS02980 and BWI76_RS02985 are separated by 67 nucleotides BWI76_RS02985 and BWI76_RS02990 are separated by 112 nucleotides
BWI76_RS02970: BWI76_RS02970 - trehalose operon repressor, at 608,910 to 609,857
_RS02970
BWI76_RS02975: BWI76_RS02975 - hypothetical protein, at 609,895 to 610,091
_RS02975
BWI76_RS02980: BWI76_RS02980 - type I magnesium transporting ATPase, at 610,237 to 612,945
_RS02980
BWI76_RS02985: BWI76_RS02985 - reactive intermediate/imine deaminase, at 613,013 to 613,399
_RS02985
BWI76_RS02990: BWI76_RS02990 - aspartate carbamoyltransferase regulatory subunit, at 613,512 to 613,973
_RS02990
Position (kb) 610
611
612
613 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 609.396 kb on - strand, within BWI76_RS02970 at 609.488 kb on + strand, within BWI76_RS02970 at 609.617 kb on - strand, within BWI76_RS02970 at 609.668 kb on - strand, within BWI76_RS02970 at 609.888 kb on - strand at 609.890 kb on + strand at 609.898 kb on - strand at 610.134 kb on + strand at 610.197 kb on - strand at 610.303 kb on - strand at 610.567 kb on + strand, within BWI76_RS02980 at 610.852 kb on - strand, within BWI76_RS02980 at 610.961 kb on - strand, within BWI76_RS02980 at 610.963 kb on - strand, within BWI76_RS02980 at 611.396 kb on - strand, within BWI76_RS02980 at 611.509 kb on + strand, within BWI76_RS02980 at 611.509 kb on + strand, within BWI76_RS02980 at 611.517 kb on - strand, within BWI76_RS02980 at 611.519 kb on - strand, within BWI76_RS02980 at 611.625 kb on + strand, within BWI76_RS02980 at 612.313 kb on + strand, within BWI76_RS02980 at 612.451 kb on - strand, within BWI76_RS02980 at 612.502 kb on + strand, within BWI76_RS02980 at 613.314 kb on - strand, within BWI76_RS02985 at 613.348 kb on + strand, within BWI76_RS02985 at 613.349 kb on - strand, within BWI76_RS02985 at 613.552 kb on - strand at 613.889 kb on + strand, within BWI76_RS02990 at 613.889 kb on + strand, within BWI76_RS02990 at 613.889 kb on + strand, within BWI76_RS02990 at 613.917 kb on + strand, within BWI76_RS02990 at 613.941 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 609,396 - BWI76_RS02970 0.51 +0.7 609,488 + BWI76_RS02970 0.61 -1.2 609,617 - BWI76_RS02970 0.75 -1.0 609,668 - BWI76_RS02970 0.80 -0.3 609,888 - -0.4 609,890 + +0.1 609,898 - +2.3 610,134 + -0.1 610,197 - -1.0 610,303 - +0.3 610,567 + BWI76_RS02980 0.12 +0.3 610,852 - BWI76_RS02980 0.23 -1.2 610,961 - BWI76_RS02980 0.27 -1.0 610,963 - BWI76_RS02980 0.27 +0.4 611,396 - BWI76_RS02980 0.43 -0.5 611,509 + BWI76_RS02980 0.47 +0.2 611,509 + BWI76_RS02980 0.47 +4.3 611,517 - BWI76_RS02980 0.47 -0.3 611,519 - BWI76_RS02980 0.47 -0.6 611,625 + BWI76_RS02980 0.51 +0.1 612,313 + BWI76_RS02980 0.77 +3.6 612,451 - BWI76_RS02980 0.82 -0.3 612,502 + BWI76_RS02980 0.84 -0.8 613,314 - BWI76_RS02985 0.78 -0.4 613,348 + BWI76_RS02985 0.87 +1.3 613,349 - BWI76_RS02985 0.87 -0.6 613,552 - -0.9 613,889 + BWI76_RS02990 0.82 +0.1 613,889 + BWI76_RS02990 0.82 -0.2 613,889 + BWI76_RS02990 0.82 -0.5 613,917 + BWI76_RS02990 0.88 -0.3 613,941 - -0.7
Or see this region's nucleotide sequence