Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00060 and BWI76_RS00065 are separated by 147 nucleotides BWI76_RS00065 and BWI76_RS00070 are separated by 326 nucleotides
BWI76_RS00060: BWI76_RS00060 - N-acetylneuraminate lyase, at 11,227 to 12,123
_RS00060
BWI76_RS00065: BWI76_RS00065 - MurR/RpiR family transcriptional regulator, at 12,271 to 13,152
_RS00065
BWI76_RS00070: BWI76_RS00070 - MFS transporter, at 13,479 to 14,969
_RS00070
Position (kb) 12
13
14 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 11.485 kb on + strand, within BWI76_RS00060 at 11.485 kb on + strand, within BWI76_RS00060 at 11.697 kb on - strand, within BWI76_RS00060 at 11.935 kb on - strand, within BWI76_RS00060 at 12.356 kb on - strand at 12.428 kb on + strand, within BWI76_RS00065 at 12.436 kb on - strand, within BWI76_RS00065 at 12.465 kb on - strand, within BWI76_RS00065 at 12.527 kb on - strand, within BWI76_RS00065 at 12.584 kb on + strand, within BWI76_RS00065 at 12.584 kb on + strand, within BWI76_RS00065 at 12.695 kb on - strand, within BWI76_RS00065 at 12.749 kb on + strand, within BWI76_RS00065 at 12.749 kb on + strand, within BWI76_RS00065 at 12.822 kb on + strand, within BWI76_RS00065 at 13.124 kb on + strand at 13.253 kb on + strand at 13.471 kb on - strand at 13.471 kb on - strand at 13.575 kb on + strand at 13.624 kb on + strand at 13.648 kb on - strand, within BWI76_RS00070 at 13.693 kb on + strand, within BWI76_RS00070 at 13.794 kb on - strand, within BWI76_RS00070 at 13.842 kb on - strand, within BWI76_RS00070 at 13.858 kb on + strand, within BWI76_RS00070 at 13.858 kb on + strand, within BWI76_RS00070 at 13.980 kb on - strand, within BWI76_RS00070 at 13.993 kb on - strand, within BWI76_RS00070 at 14.009 kb on - strand, within BWI76_RS00070
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 11,485 + BWI76_RS00060 0.29 -0.0 11,485 + BWI76_RS00060 0.29 -0.8 11,697 - BWI76_RS00060 0.52 -0.3 11,935 - BWI76_RS00060 0.79 -0.4 12,356 - -1.4 12,428 + BWI76_RS00065 0.18 -0.6 12,436 - BWI76_RS00065 0.19 -1.1 12,465 - BWI76_RS00065 0.22 -1.6 12,527 - BWI76_RS00065 0.29 -1.9 12,584 + BWI76_RS00065 0.35 +0.7 12,584 + BWI76_RS00065 0.35 -1.0 12,695 - BWI76_RS00065 0.48 -1.8 12,749 + BWI76_RS00065 0.54 -1.6 12,749 + BWI76_RS00065 0.54 -2.0 12,822 + BWI76_RS00065 0.62 -2.4 13,124 + +0.3 13,253 + -0.0 13,471 - -0.4 13,471 - -0.3 13,575 + -0.9 13,624 + +0.0 13,648 - BWI76_RS00070 0.11 +1.6 13,693 + BWI76_RS00070 0.14 -1.2 13,794 - BWI76_RS00070 0.21 +0.4 13,842 - BWI76_RS00070 0.24 +0.3 13,858 + BWI76_RS00070 0.25 -1.6 13,858 + BWI76_RS00070 0.25 -3.2 13,980 - BWI76_RS00070 0.34 -0.8 13,993 - BWI76_RS00070 0.34 +0.1 14,009 - BWI76_RS00070 0.36 +3.0
Or see this region's nucleotide sequence