Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19535
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X |
---|---|---|---|---|---|
remove | |||||
4,082,209 | + | +2.4 | |||
4,082,217 | - | +0.4 | |||
4,082,217 | - | -0.7 | |||
4,082,307 | - | -0.1 | |||
4,082,309 | - | +0.0 | |||
4,082,309 | - | -0.2 | |||
4,082,426 | + | +0.2 | |||
4,082,455 | - | -0.2 | |||
4,082,510 | + | BWI76_RS19530 | 0.15 | +0.1 | |
4,082,580 | + | BWI76_RS19530 | 0.27 | +0.2 | |
4,082,580 | + | BWI76_RS19530 | 0.27 | +0.1 | |
4,082,801 | - | BWI76_RS19530 | 0.65 | -0.0 | |
4,082,925 | - | BWI76_RS19530 | 0.86 | -1.9 | |
4,083,031 | + | -0.4 | |||
4,083,039 | - | -0.7 | |||
4,083,120 | + | -0.1 | |||
4,083,254 | - | BWI76_RS19535 | 0.16 | -1.8 | |
4,083,273 | - | BWI76_RS19535 | 0.19 | -0.6 | |
4,083,432 | - | BWI76_RS19535 | 0.47 | -0.4 | |
4,083,767 | - | +0.2 | |||
4,083,860 | + | +0.3 | |||
4,084,216 | + | BWI76_RS19540 | 0.26 | -0.1 | |
4,084,613 | + | BWI76_RS19540 | 0.54 | -0.2 | |
4,084,636 | - | BWI76_RS19540 | 0.55 | -0.4 |
Or see this region's nucleotide sequence