Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22270
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 4,640,663 | + | BWI76_RS22265 | 0.35 | -0.1 | |
| 4,640,894 | - | BWI76_RS22265 | 0.56 | +0.2 | |
| 4,641,366 | + | -0.1 | |||
| 4,641,391 | - | -0.0 | |||
| 4,641,528 | - | -0.3 | |||
| 4,641,651 | - | -0.1 | |||
| 4,641,721 | - | -0.2 | |||
| 4,641,776 | - | BWI76_RS22270 | 0.12 | -0.0 | |
| 4,641,839 | + | BWI76_RS22270 | 0.18 | +1.3 | |
| 4,641,847 | - | BWI76_RS22270 | 0.19 | -0.1 | |
| 4,641,893 | + | BWI76_RS22270 | 0.24 | +0.5 | |
| 4,641,930 | - | BWI76_RS22270 | 0.27 | -0.2 | |
| 4,642,218 | + | BWI76_RS22270 | 0.56 | +0.3 | |
| 4,642,226 | - | BWI76_RS22270 | 0.57 | +1.9 | |
| 4,642,582 | + | -0.5 | |||
| 4,642,590 | - | -0.4 | |||
| 4,642,671 | - | +0.1 | |||
| 4,642,674 | + | -0.1 | |||
| 4,642,682 | - | +1.2 | |||
| 4,642,944 | + | BWI76_RS22275 | 0.12 | +1.2 | |
| 4,642,973 | + | BWI76_RS22275 | 0.13 | -1.4 | |
| 4,643,190 | + | BWI76_RS22275 | 0.23 | -0.2 | |
| 4,643,292 | - | BWI76_RS22275 | 0.28 | -0.3 | |
| 4,643,427 | - | BWI76_RS22275 | 0.34 | +0.9 | |
| 4,643,592 | - | BWI76_RS22275 | 0.41 | +0.0 | |
| 4,643,607 | - | BWI76_RS22275 | 0.42 | -0.5 |
Or see this region's nucleotide sequence