Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12390
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 2,587,287 | + | BWI76_RS12385 | 0.33 | -0.5 | |
| 2,587,321 | + | BWI76_RS12385 | 0.36 | -0.4 | |
| 2,587,367 | + | BWI76_RS12385 | 0.39 | -0.7 | |
| 2,587,471 | + | BWI76_RS12385 | 0.48 | +0.6 | |
| 2,587,548 | - | BWI76_RS12385 | 0.54 | -0.4 | |
| 2,587,560 | + | BWI76_RS12385 | 0.55 | -1.3 | |
| 2,587,568 | - | -1.5 | |||
| 2,587,810 | + | BWI76_RS12385 | 0.74 | -1.4 | |
| 2,587,963 | + | BWI76_RS12385 | 0.86 | -0.1 | |
| 2,588,096 | + | -0.4 | |||
| 2,588,104 | - | -1.8 | |||
| 2,588,116 | - | -1.7 | |||
| 2,588,230 | - | -0.5 | |||
| 2,588,365 | + | -0.2 | |||
| 2,588,435 | + | BWI76_RS12390 | 0.55 | -1.8 | |
| 2,588,494 | + | BWI76_RS12390 | 0.75 | -0.1 | |
| 2,588,624 | - | -0.6 | |||
| 2,588,624 | - | -0.2 | |||
| 2,588,649 | - | -1.0 | |||
| 2,588,675 | - | -0.3 | |||
| 2,588,710 | + | -1.2 | |||
| 2,588,951 | + | -0.2 | |||
| 2,588,994 | - | -1.5 | |||
| 2,589,188 | - | BWI76_RS12395 | 0.27 | -0.5 | |
| 2,589,353 | + | BWI76_RS12395 | 0.44 | -0.3 | |
| 2,589,381 | - | BWI76_RS12395 | 0.47 | -1.1 | |
| 2,589,495 | + | BWI76_RS12395 | 0.59 | -0.9 |
Or see this region's nucleotide sequence