Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21115
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 4,422,255 | + | BWI76_RS21110 | 0.86 | +0.6 | |
| 4,422,492 | - | +0.6 | |||
| 4,422,517 | - | -0.8 | |||
| 4,422,519 | + | +0.9 | |||
| 4,422,606 | - | +0.5 | |||
| 4,422,653 | + | -0.4 | |||
| 4,422,894 | + | -0.2 | |||
| 4,423,226 | + | +0.4 | |||
| 4,423,482 | - | BWI76_RS21115 | 0.38 | -0.3 | |
| 4,423,578 | - | BWI76_RS21115 | 0.49 | +1.1 | |
| 4,423,745 | + | BWI76_RS21115 | 0.69 | +0.9 | |
| 4,423,980 | + | -0.1 | |||
| 4,424,282 | + | BWI76_RS21120 | 0.31 | -2.5 | |
| 4,424,282 | + | BWI76_RS21120 | 0.31 | +0.8 | |
| 4,424,282 | + | BWI76_RS21120 | 0.31 | +2.8 | |
| 4,424,290 | - | BWI76_RS21120 | 0.32 | +0.8 | |
| 4,424,290 | - | -1.2 | |||
| 4,424,292 | - | BWI76_RS21120 | 0.33 | -0.0 | |
| 4,424,384 | - | BWI76_RS21120 | 0.44 | -0.7 | |
| 4,424,529 | + | BWI76_RS21120 | 0.63 | -0.6 | |
| 4,424,681 | - | BWI76_RS21120 | 0.83 | +0.4 |
Or see this region's nucleotide sequence