Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19755

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19750 and BWI76_RS19755 are separated by 316 nucleotidesBWI76_RS19755 and BWI76_RS19760 are separated by 119 nucleotides BWI76_RS19750: BWI76_RS19750 - elongation factor P-like protein YeiP, at 4,128,667 to 4,129,239 _RS19750 BWI76_RS19755: BWI76_RS19755 - fructuronate reductase, at 4,129,556 to 4,131,022 _RS19755 BWI76_RS19760: BWI76_RS19760 - GTP-binding protein, at 4,131,142 to 4,132,119 _RS19760 Position (kb) 4129 4130 4131 4132Strain fitness (log2 ratio) -1 0 1 2at 4128.561 kb on - strandat 4128.644 kb on + strandat 4128.794 kb on + strand, within BWI76_RS19750at 4128.963 kb on + strand, within BWI76_RS19750at 4129.178 kb on + strand, within BWI76_RS19750at 4129.933 kb on - strand, within BWI76_RS19755at 4129.973 kb on + strand, within BWI76_RS19755at 4130.183 kb on - strand, within BWI76_RS19755at 4130.610 kb on + strand, within BWI76_RS19755at 4130.622 kb on - strand, within BWI76_RS19755at 4130.773 kb on - strand, within BWI76_RS19755at 4130.923 kb on + strandat 4131.102 kb on + strandat 4131.499 kb on - strand, within BWI76_RS19760at 4131.616 kb on + strand, within BWI76_RS19760at 4131.690 kb on + strand, within BWI76_RS19760at 4131.852 kb on - strand, within BWI76_RS19760

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
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4,128,561 - -0.3
4,128,644 + +2.0
4,128,794 + BWI76_RS19750 0.22 -0.6
4,128,963 + BWI76_RS19750 0.52 +0.6
4,129,178 + BWI76_RS19750 0.89 +0.4
4,129,933 - BWI76_RS19755 0.26 +1.0
4,129,973 + BWI76_RS19755 0.28 +1.3
4,130,183 - BWI76_RS19755 0.43 -0.1
4,130,610 + BWI76_RS19755 0.72 +1.2
4,130,622 - BWI76_RS19755 0.73 +1.2
4,130,773 - BWI76_RS19755 0.83 +0.2
4,130,923 + +0.8
4,131,102 + -0.1
4,131,499 - BWI76_RS19760 0.37 +0.3
4,131,616 + BWI76_RS19760 0.48 +0.4
4,131,690 + BWI76_RS19760 0.56 +0.2
4,131,852 - BWI76_RS19760 0.73 -0.2

Or see this region's nucleotide sequence