Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19650

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19645 and BWI76_RS19650 are separated by 288 nucleotidesBWI76_RS19650 and BWI76_RS19655 are separated by 155 nucleotides BWI76_RS19645: BWI76_RS19645 - galactose ABC transporter substrate-binding protein, at 4,105,609 to 4,106,607 _RS19645 BWI76_RS19650: BWI76_RS19650 - DNA-binding transcriptional regulator GalS, at 4,106,896 to 4,107,918 _RS19650 BWI76_RS19655: BWI76_RS19655 - hypothetical protein, at 4,108,074 to 4,109,231 _RS19655 Position (kb) 4106 4107 4108Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4106.096 kb on + strand, within BWI76_RS19645at 4106.111 kb on + strand, within BWI76_RS19645at 4106.187 kb on - strand, within BWI76_RS19645at 4106.239 kb on + strand, within BWI76_RS19645at 4106.295 kb on - strand, within BWI76_RS19645at 4106.466 kb on + strand, within BWI76_RS19645at 4106.471 kb on + strand, within BWI76_RS19645at 4106.532 kb on + strandat 4106.538 kb on - strandat 4106.587 kb on + strandat 4106.610 kb on + strandat 4106.718 kb on + strandat 4106.802 kb on + strandat 4107.004 kb on + strand, within BWI76_RS19650at 4107.181 kb on + strand, within BWI76_RS19650at 4107.198 kb on - strand, within BWI76_RS19650at 4107.207 kb on + strand, within BWI76_RS19650at 4107.398 kb on + strand, within BWI76_RS19650at 4107.434 kb on - strand, within BWI76_RS19650at 4107.528 kb on + strand, within BWI76_RS19650at 4107.680 kb on + strand, within BWI76_RS19650at 4107.850 kb on + strandat 4108.026 kb on - strandat 4108.231 kb on - strand, within BWI76_RS19655at 4108.385 kb on - strand, within BWI76_RS19655at 4108.552 kb on + strand, within BWI76_RS19655

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
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4,106,096 + BWI76_RS19645 0.49 -2.8
4,106,111 + BWI76_RS19645 0.50 -1.2
4,106,187 - BWI76_RS19645 0.58 +0.8
4,106,239 + BWI76_RS19645 0.63 +0.2
4,106,295 - BWI76_RS19645 0.69 -0.1
4,106,466 + BWI76_RS19645 0.86 +0.4
4,106,471 + BWI76_RS19645 0.86 +0.3
4,106,532 + +1.3
4,106,538 - -1.2
4,106,587 + +0.1
4,106,610 + -0.2
4,106,718 + +0.1
4,106,802 + -1.0
4,107,004 + BWI76_RS19650 0.11 +0.1
4,107,181 + BWI76_RS19650 0.28 +2.4
4,107,198 - BWI76_RS19650 0.30 +0.8
4,107,207 + BWI76_RS19650 0.30 +0.2
4,107,398 + BWI76_RS19650 0.49 -0.0
4,107,434 - BWI76_RS19650 0.53 +0.5
4,107,528 + BWI76_RS19650 0.62 -1.8
4,107,680 + BWI76_RS19650 0.77 +2.0
4,107,850 + -0.9
4,108,026 - -0.2
4,108,231 - BWI76_RS19655 0.14 +0.6
4,108,385 - BWI76_RS19655 0.27 +0.4
4,108,552 + BWI76_RS19655 0.41 +0.1

Or see this region's nucleotide sequence