Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19450

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19445 and BWI76_RS19450 overlap by 1 nucleotidesBWI76_RS19450 and BWI76_RS19455 overlap by 4 nucleotides BWI76_RS19445: BWI76_RS19445 - hypothetical protein, at 4,062,214 to 4,064,499 _RS19445 BWI76_RS19450: BWI76_RS19450 - hypothetical protein, at 4,064,499 to 4,065,635 _RS19450 BWI76_RS19455: BWI76_RS19455 - hypothetical protein, at 4,065,632 to 4,067,638 _RS19455 Position (kb) 4064 4065 4066Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4063.553 kb on + strand, within BWI76_RS19445at 4064.182 kb on + strand, within BWI76_RS19445at 4064.352 kb on - strandat 4064.535 kb on + strandat 4064.535 kb on - strandat 4064.587 kb on + strandat 4064.653 kb on + strand, within BWI76_RS19450at 4064.725 kb on + strand, within BWI76_RS19450at 4064.867 kb on - strand, within BWI76_RS19450at 4065.057 kb on + strand, within BWI76_RS19450at 4065.162 kb on + strand, within BWI76_RS19450at 4065.696 kb on - strandat 4065.765 kb on - strandat 4065.797 kb on + strandat 4066.192 kb on + strand, within BWI76_RS19455at 4066.619 kb on + strand, within BWI76_RS19455

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
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4,063,553 + BWI76_RS19445 0.59 +0.5
4,064,182 + BWI76_RS19445 0.86 -0.4
4,064,352 - -0.2
4,064,535 + +0.3
4,064,535 - +0.5
4,064,587 + +4.7
4,064,653 + BWI76_RS19450 0.14 -1.2
4,064,725 + BWI76_RS19450 0.20 -1.7
4,064,867 - BWI76_RS19450 0.32 -3.2
4,065,057 + BWI76_RS19450 0.49 -0.8
4,065,162 + BWI76_RS19450 0.58 +0.3
4,065,696 - +0.7
4,065,765 - -0.4
4,065,797 + +0.6
4,066,192 + BWI76_RS19455 0.28 -0.1
4,066,619 + BWI76_RS19455 0.49 -0.3

Or see this region's nucleotide sequence