Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18240
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
3,789,109 | + | -2.8 | |||
3,789,429 | + | BWI76_RS18235 | 0.42 | +0.4 | |
3,789,542 | - | BWI76_RS18235 | 0.56 | -0.0 | |
3,789,645 | - | BWI76_RS18235 | 0.69 | +1.2 | |
3,789,754 | + | BWI76_RS18235 | 0.83 | +1.7 | |
3,789,811 | - | BWI76_RS18235 | 0.90 | -0.2 | |
3,789,961 | - | +0.1 | |||
3,790,092 | - | -0.2 | |||
3,790,596 | + | BWI76_RS18240 | 0.55 | -1.4 | |
3,790,603 | - | BWI76_RS18240 | 0.56 | -2.7 | |
3,791,010 | - | -2.9 | |||
3,791,276 | - | BWI76_RS18245 | 0.15 | -0.1 | |
3,791,276 | - | BWI76_RS18245 | 0.15 | +0.2 | |
3,791,298 | + | BWI76_RS18245 | 0.17 | -0.2 | |
3,791,303 | + | BWI76_RS18245 | 0.17 | +0.2 | |
3,791,306 | - | BWI76_RS18245 | 0.17 | -1.8 | |
3,791,387 | - | BWI76_RS18245 | 0.22 | -0.2 | |
3,791,438 | + | BWI76_RS18245 | 0.26 | +0.0 | |
3,791,446 | + | BWI76_RS18245 | 0.26 | +0.8 | |
3,791,555 | - | BWI76_RS18245 | 0.34 | -0.2 | |
3,791,555 | - | BWI76_RS18245 | 0.34 | -0.8 | |
3,791,567 | - | BWI76_RS18245 | 0.34 | -0.1 | |
3,791,684 | + | BWI76_RS18245 | 0.42 | +0.3 | |
3,791,909 | + | BWI76_RS18245 | 0.57 | -0.5 |
Or see this region's nucleotide sequence