Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06730 and BWI76_RS06735 are separated by 111 nucleotides BWI76_RS06735 and BWI76_RS06740 overlap by 1 nucleotides BWI76_RS06740 and BWI76_RS06745 overlap by 4 nucleotides BWI76_RS06745 and BWI76_RS06750 are separated by 100 nucleotides
BWI76_RS06730: BWI76_RS06730 - lac repressor, at 1,412,617 to 1,413,690
_RS06730
BWI76_RS06735: BWI76_RS06735 - 50S ribosomal protein L31, at 1,413,802 to 1,414,065
_RS06735
BWI76_RS06740: BWI76_RS06740 - 50S ribosomal protein L36, at 1,414,065 to 1,414,205
_RS06740
BWI76_RS06745: BWI76_RS06745 - N-acetyltransferase GCN5, at 1,414,202 to 1,414,900
_RS06745
BWI76_RS06750: BWI76_RS06750 - GntR family transcriptional regulator with, at 1,415,001 to 1,416,455
_RS06750
Position (kb) 1413
1414
1415 Strain fitness (log2 ratio) -1
0
1
2 at 1413.248 kb on + strand, within BWI76_RS06730 at 1413.536 kb on - strand, within BWI76_RS06730 at 1413.592 kb on + strand at 1413.622 kb on + strand at 1413.657 kb on + strand at 1413.657 kb on + strand at 1413.665 kb on - strand at 1413.907 kb on + strand, within BWI76_RS06735 at 1414.080 kb on + strand, within BWI76_RS06740 at 1414.090 kb on + strand, within BWI76_RS06740 at 1414.169 kb on + strand, within BWI76_RS06740 at 1414.533 kb on + strand, within BWI76_RS06745 at 1414.656 kb on + strand, within BWI76_RS06745 at 1414.752 kb on + strand at 1414.762 kb on + strand, within BWI76_RS06745 at 1414.893 kb on - strand at 1414.903 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X remove 1,413,248 + BWI76_RS06730 0.59 +0.3 1,413,536 - BWI76_RS06730 0.86 +0.1 1,413,592 + +0.9 1,413,622 + -0.5 1,413,657 + +0.0 1,413,657 + +0.0 1,413,665 - +1.0 1,413,907 + BWI76_RS06735 0.40 -0.9 1,414,080 + BWI76_RS06740 0.11 +0.3 1,414,090 + BWI76_RS06740 0.18 +0.6 1,414,169 + BWI76_RS06740 0.74 -0.5 1,414,533 + BWI76_RS06745 0.47 +1.9 1,414,656 + BWI76_RS06745 0.65 +0.6 1,414,752 + -1.4 1,414,762 + BWI76_RS06745 0.80 -1.0 1,414,893 - -0.4 1,414,903 - -1.2
Or see this region's nucleotide sequence