Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS03180
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
655,377 | - | BWI76_RS03175 | 0.43 | -0.2 | |
655,421 | - | BWI76_RS03175 | 0.49 | +0.6 | |
655,481 | - | BWI76_RS03175 | 0.57 | +0.1 | |
655,714 | + | BWI76_RS03175 | 0.89 | +0.3 | |
655,714 | + | BWI76_RS03175 | 0.89 | -0.3 | |
655,733 | + | -0.3 | |||
656,051 | + | +0.4 | |||
656,059 | - | +0.7 | |||
656,059 | - | -0.2 | |||
656,292 | + | +0.6 | |||
656,402 | + | BWI76_RS03180 | 0.21 | -0.5 | |
656,402 | + | BWI76_RS03180 | 0.21 | -0.6 | |
656,410 | - | BWI76_RS03180 | 0.24 | -1.1 | |
656,784 | - | BWI76_RS03185 | 0.31 | +0.4 | |
656,802 | + | BWI76_RS03185 | 0.35 | +0.1 | |
656,868 | - | BWI76_RS03185 | 0.46 | -0.3 | |
656,960 | - | BWI76_RS03185 | 0.63 | -1.5 | |
656,994 | - | BWI76_RS03185 | 0.69 | +1.4 | |
657,258 | + | BWI76_RS03190 | 0.42 | -0.8 | |
657,260 | + | BWI76_RS03190 | 0.43 | +0.2 | |
657,330 | + | BWI76_RS03190 | 0.73 | +1.5 | |
657,416 | - | -0.2 | |||
657,435 | + | BWI76_RS03195 | 0.15 | -0.2 | |
657,453 | - | BWI76_RS03195 | 0.21 | -1.1 | |
657,476 | - | BWI76_RS03195 | 0.28 | +0.4 |
Or see this region's nucleotide sequence