Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12170
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
2,548,801 | + | BWI76_RS12155 | 0.78 | -0.3 | |
2,548,801 | + | BWI76_RS12155 | 0.78 | +0.1 | |
2,548,878 | + | -0.2 | |||
2,548,890 | + | +0.0 | |||
2,548,898 | + | -1.3 | |||
2,548,925 | - | -0.9 | |||
2,548,934 | - | +0.4 | |||
2,548,944 | - | -0.4 | |||
2,548,956 | + | -0.7 | |||
2,548,969 | - | BWI76_RS12160 | 0.10 | +0.5 | |
2,548,969 | - | BWI76_RS12160 | 0.10 | -0.1 | |
2,548,970 | - | BWI76_RS12160 | 0.10 | -0.5 | |
2,549,023 | + | BWI76_RS12160 | 0.19 | -1.6 | |
2,549,023 | + | BWI76_RS12160 | 0.19 | -0.4 | |
2,549,023 | + | BWI76_RS12160 | 0.19 | -1.8 | |
2,549,031 | - | BWI76_RS12160 | 0.21 | -0.6 | |
2,549,133 | + | BWI76_RS12160 | 0.38 | -1.4 | |
2,549,134 | + | BWI76_RS12160 | 0.38 | -0.5 | |
2,549,313 | - | BWI76_RS12160 | 0.68 | -1.6 | |
2,549,452 | - | -1.0 | |||
2,549,937 | - | BWI76_RS12170 | 0.75 | -0.7 | |
2,549,963 | + | BWI76_RS12170 | 0.84 | -2.4 | |
2,549,989 | + | -3.1 | |||
2,550,030 | + | -1.7 | |||
2,550,058 | - | -1.8 |
Or see this region's nucleotide sequence