Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15315

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS15310 and BWI76_RS15315 are separated by 117 nucleotidesBWI76_RS15315 and BWI76_RS15320 are separated by 115 nucleotidesBWI76_RS15320 and BWI76_RS15325 are separated by 9 nucleotides BWI76_RS15310: BWI76_RS15310 - MFS transporter, at 3,206,442 to 3,207,635 _RS15310 BWI76_RS15315: BWI76_RS15315 - DNA-binding protein, at 3,207,753 to 3,208,223 _RS15315 BWI76_RS15320: BWI76_RS15320 - ABC transporter ATP-binding protein, at 3,208,339 to 3,209,037 _RS15320 BWI76_RS15325: BWI76_RS15325 - ABC transporter ATP-binding protein, at 3,209,047 to 3,209,844 _RS15325 Position (kb) 3207 3208 3209Strain fitness (log2 ratio) -1 0 1 2at 3206.762 kb on - strand, within BWI76_RS15310at 3206.764 kb on - strand, within BWI76_RS15310at 3206.925 kb on - strand, within BWI76_RS15310at 3207.014 kb on + strandat 3207.022 kb on - strand, within BWI76_RS15310at 3207.070 kb on + strand, within BWI76_RS15310at 3207.071 kb on - strand, within BWI76_RS15310at 3207.073 kb on - strand, within BWI76_RS15310at 3207.078 kb on - strand, within BWI76_RS15310at 3207.282 kb on - strand, within BWI76_RS15310at 3207.338 kb on + strand, within BWI76_RS15310at 3207.361 kb on + strand, within BWI76_RS15310at 3207.711 kb on + strandat 3207.730 kb on - strandat 3207.952 kb on + strand, within BWI76_RS15315at 3207.960 kb on - strand, within BWI76_RS15315at 3207.987 kb on + strandat 3207.995 kb on - strand, within BWI76_RS15315

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
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3,206,762 - BWI76_RS15310 0.27 +0.4
3,206,764 - BWI76_RS15310 0.27 -0.1
3,206,925 - BWI76_RS15310 0.40 -0.2
3,207,014 + +1.7
3,207,022 - BWI76_RS15310 0.49 -0.3
3,207,070 + BWI76_RS15310 0.53 +0.0
3,207,071 - BWI76_RS15310 0.53 -0.1
3,207,073 - BWI76_RS15310 0.53 -1.0
3,207,078 - BWI76_RS15310 0.53 +0.1
3,207,282 - BWI76_RS15310 0.70 -0.5
3,207,338 + BWI76_RS15310 0.75 -0.3
3,207,361 + BWI76_RS15310 0.77 -0.6
3,207,711 + +0.4
3,207,730 - +0.0
3,207,952 + BWI76_RS15315 0.42 +1.8
3,207,960 - BWI76_RS15315 0.44 +0.7
3,207,987 + +2.7
3,207,995 - BWI76_RS15315 0.51 +0.1

Or see this region's nucleotide sequence