Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08945
Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X |
---|---|---|---|---|---|
remove | |||||
1,882,571 | - | -0.7 | |||
1,882,576 | + | -0.5 | |||
1,882,589 | + | -0.2 | |||
1,882,591 | + | -0.4 | |||
1,882,661 | + | -0.3 | |||
1,882,839 | + | BWI76_RS08940 | 0.30 | -0.4 | |
1,882,898 | + | BWI76_RS08940 | 0.39 | -0.0 | |
1,883,066 | - | BWI76_RS08940 | 0.64 | +0.1 | |
1,883,139 | + | BWI76_RS08940 | 0.74 | -0.2 | |
1,883,152 | + | BWI76_RS08940 | 0.76 | -0.0 | |
1,883,177 | - | BWI76_RS08940 | 0.80 | -0.0 | |
1,883,457 | - | -0.8 | |||
1,883,539 | + | -0.1 | |||
1,883,685 | + | BWI76_RS08945 | 0.14 | -0.2 | |
1,883,730 | + | BWI76_RS08945 | 0.16 | +0.2 | |
1,883,954 | + | BWI76_RS08945 | 0.26 | -0.0 | |
1,884,583 | + | BWI76_RS08945 | 0.54 | -0.3 | |
1,884,664 | + | BWI76_RS08945 | 0.57 | -0.1 | |
1,885,862 | + | +0.1 | |||
1,886,031 | - | BWI76_RS08950 | 0.14 | +0.0 | |
1,886,102 | - | BWI76_RS08950 | 0.26 | -0.2 | |
1,886,131 | - | BWI76_RS08950 | 0.31 | -0.2 | |
1,886,365 | + | BWI76_RS08950 | 0.69 | -0.7 | |
1,886,439 | + | BWI76_RS08950 | 0.81 | +0.4 |
Or see this region's nucleotide sequence