Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00650 and BWI76_RS00655 overlap by 4 nucleotides BWI76_RS00655 and BWI76_RS00660 overlap by 1 nucleotides
BWI76_RS00650: BWI76_RS00650 - rhamnose ABC transporter permease component, at 132,296 to 133,300
_RS00650
BWI76_RS00655: BWI76_RS00655 - inner-membrane translocator, at 133,297 to 134,301
_RS00655
BWI76_RS00660: BWI76_RS00660 - ABC transporter, at 134,301 to 135,812
_RS00660
Position (kb) 133
134
135 Strain fitness (log2 ratio) -2
-1
0
1 at 132.523 kb on + strand, within BWI76_RS00650 at 132.619 kb on + strand, within BWI76_RS00650 at 132.684 kb on + strand, within BWI76_RS00650 at 132.786 kb on - strand, within BWI76_RS00650 at 132.791 kb on - strand, within BWI76_RS00650 at 132.832 kb on + strand, within BWI76_RS00650 at 132.897 kb on + strand, within BWI76_RS00650 at 132.907 kb on + strand, within BWI76_RS00650 at 132.947 kb on + strand, within BWI76_RS00650 at 133.029 kb on - strand, within BWI76_RS00650 at 133.229 kb on - strand at 133.229 kb on - strand at 133.284 kb on - strand at 133.344 kb on + strand at 133.344 kb on + strand at 133.472 kb on - strand at 133.729 kb on + strand, within BWI76_RS00655 at 133.737 kb on - strand, within BWI76_RS00655 at 133.761 kb on + strand, within BWI76_RS00655 at 133.771 kb on - strand, within BWI76_RS00655 at 133.796 kb on + strand, within BWI76_RS00655 at 133.866 kb on - strand, within BWI76_RS00655 at 133.935 kb on - strand, within BWI76_RS00655 at 133.974 kb on - strand, within BWI76_RS00655 at 134.062 kb on - strand, within BWI76_RS00655 at 134.085 kb on + strand, within BWI76_RS00655 at 134.125 kb on - strand, within BWI76_RS00655 at 134.187 kb on + strand, within BWI76_RS00655 at 134.209 kb on + strand at 134.370 kb on + strand at 134.485 kb on + strand, within BWI76_RS00660 at 134.488 kb on - strand, within BWI76_RS00660 at 134.896 kb on + strand, within BWI76_RS00660 at 134.975 kb on + strand, within BWI76_RS00660 at 135.066 kb on + strand, within BWI76_RS00660 at 135.149 kb on - strand, within BWI76_RS00660 at 135.151 kb on - strand at 135.207 kb on - strand, within BWI76_RS00660
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X remove 132,523 + BWI76_RS00650 0.23 -1.0 132,619 + BWI76_RS00650 0.32 +0.5 132,684 + BWI76_RS00650 0.39 -0.4 132,786 - BWI76_RS00650 0.49 -0.3 132,791 - BWI76_RS00650 0.49 +0.4 132,832 + BWI76_RS00650 0.53 -0.7 132,897 + BWI76_RS00650 0.60 -0.1 132,907 + BWI76_RS00650 0.61 -0.2 132,947 + BWI76_RS00650 0.65 +0.5 133,029 - BWI76_RS00650 0.73 -0.9 133,229 - -0.1 133,229 - -0.3 133,284 - -0.9 133,344 + +0.2 133,344 + -0.2 133,472 - -0.4 133,729 + BWI76_RS00655 0.43 +0.1 133,737 - BWI76_RS00655 0.44 -0.5 133,761 + BWI76_RS00655 0.46 -0.7 133,771 - BWI76_RS00655 0.47 -0.9 133,796 + BWI76_RS00655 0.50 -0.0 133,866 - BWI76_RS00655 0.57 -1.4 133,935 - BWI76_RS00655 0.63 -0.4 133,974 - BWI76_RS00655 0.67 -0.8 134,062 - BWI76_RS00655 0.76 -2.2 134,085 + BWI76_RS00655 0.78 -0.3 134,125 - BWI76_RS00655 0.82 -1.4 134,187 + BWI76_RS00655 0.89 -0.3 134,209 + -0.8 134,370 + +0.1 134,485 + BWI76_RS00660 0.12 -0.8 134,488 - BWI76_RS00660 0.12 +0.1 134,896 + BWI76_RS00660 0.39 -0.1 134,975 + BWI76_RS00660 0.45 +0.5 135,066 + BWI76_RS00660 0.51 +1.0 135,149 - BWI76_RS00660 0.56 -0.2 135,151 - -0.0 135,207 - BWI76_RS00660 0.60 +0.7
Or see this region's nucleotide sequence