Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27360

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27350 and BWI76_RS27355 are separated by 198 nucleotidesBWI76_RS27355 and BWI76_RS27360 are separated by 20 nucleotidesBWI76_RS27360 and BWI76_RS27365 are separated by 216 nucleotides BWI76_RS27350: BWI76_RS27350 - hypothetical protein, at 5,677,498 to 5,678,175 _RS27350 BWI76_RS27355: BWI76_RS27355 - 50S ribosomal protein L33, at 5,678,374 to 5,678,541 _RS27355 BWI76_RS27360: BWI76_RS27360 - 50S ribosomal protein L28, at 5,678,562 to 5,678,798 _RS27360 BWI76_RS27365: BWI76_RS27365 - hypothetical protein, at 5,679,015 to 5,679,680 _RS27365 Position (kb) 5678 5679Strain fitness (log2 ratio) -3 -2 -1 0 1at 5677.627 kb on - strand, within BWI76_RS27350at 5677.627 kb on - strand, within BWI76_RS27350at 5677.660 kb on - strand, within BWI76_RS27350at 5677.739 kb on - strand, within BWI76_RS27350at 5677.749 kb on - strand, within BWI76_RS27350at 5677.826 kb on + strand, within BWI76_RS27350at 5677.890 kb on + strand, within BWI76_RS27350at 5677.964 kb on - strand, within BWI76_RS27350at 5678.120 kb on + strandat 5678.121 kb on - strandat 5678.130 kb on + strandat 5678.321 kb on - strandat 5679.146 kb on + strand, within BWI76_RS27365at 5679.146 kb on + strand, within BWI76_RS27365at 5679.188 kb on - strand, within BWI76_RS27365at 5679.397 kb on + strand, within BWI76_RS27365at 5679.447 kb on - strand, within BWI76_RS27365at 5679.480 kb on - strand, within BWI76_RS27365at 5679.605 kb on + strand, within BWI76_RS27365at 5679.711 kb on - strandat 5679.755 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
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5,677,627 - BWI76_RS27350 0.19 +0.4
5,677,627 - BWI76_RS27350 0.19 -0.7
5,677,660 - BWI76_RS27350 0.24 -0.3
5,677,739 - BWI76_RS27350 0.36 -1.4
5,677,749 - BWI76_RS27350 0.37 +0.1
5,677,826 + BWI76_RS27350 0.48 +0.9
5,677,890 + BWI76_RS27350 0.58 +0.2
5,677,964 - BWI76_RS27350 0.69 +0.2
5,678,120 + -0.3
5,678,121 - +0.1
5,678,130 + -1.9
5,678,321 - +0.5
5,679,146 + BWI76_RS27365 0.20 +0.2
5,679,146 + BWI76_RS27365 0.20 +1.7
5,679,188 - BWI76_RS27365 0.26 -0.8
5,679,397 + BWI76_RS27365 0.57 -1.5
5,679,447 - BWI76_RS27365 0.65 -0.1
5,679,480 - BWI76_RS27365 0.70 -3.5
5,679,605 + BWI76_RS27365 0.89 -0.3
5,679,711 - -0.4
5,679,755 + -0.5

Or see this region's nucleotide sequence