Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24890 and BWI76_RS24895 are separated by 45 nucleotides BWI76_RS24895 and BWI76_RS24900 are separated by 110 nucleotides BWI76_RS24900 and BWI76_RS24905 are separated by 64 nucleotides
BWI76_RS24890: BWI76_RS24890 - PTS system galactitol-specific transporter subunit IIC, at 5,186,094 to 5,187,467
_RS24890
BWI76_RS24895: BWI76_RS24895 - galactitol-1-phosphate 5-dehydrogenase, at 5,187,513 to 5,188,556
_RS24895
BWI76_RS24900: BWI76_RS24900 - DeoR family transcriptional regulator, at 5,188,667 to 5,189,440
_RS24900
BWI76_RS24905: BWI76_RS24905 - filamentation induced by cAMP protein fic, at 5,189,505 to 5,190,506
_RS24905
Position (kb) 5187
5188
5189 Strain fitness (log2 ratio) -1
0
1
2 at 5186.795 kb on - strand, within BWI76_RS24890 at 5186.815 kb on - strand, within BWI76_RS24890 at 5186.865 kb on - strand, within BWI76_RS24890 at 5187.146 kb on - strand, within BWI76_RS24890 at 5187.150 kb on - strand, within BWI76_RS24890 at 5187.205 kb on - strand, within BWI76_RS24890 at 5187.219 kb on + strand, within BWI76_RS24890 at 5187.285 kb on + strand, within BWI76_RS24890 at 5187.285 kb on + strand, within BWI76_RS24890 at 5187.323 kb on + strand, within BWI76_RS24890 at 5187.348 kb on - strand at 5187.368 kb on + strand at 5187.476 kb on - strand at 5187.530 kb on - strand at 5187.530 kb on - strand at 5187.621 kb on - strand, within BWI76_RS24895 at 5187.899 kb on - strand, within BWI76_RS24895 at 5188.147 kb on + strand, within BWI76_RS24895 at 5188.147 kb on + strand, within BWI76_RS24895 at 5188.286 kb on + strand, within BWI76_RS24895 at 5188.324 kb on - strand, within BWI76_RS24895 at 5188.389 kb on - strand, within BWI76_RS24895 at 5188.500 kb on + strand at 5188.674 kb on + strand at 5188.833 kb on + strand, within BWI76_RS24900 at 5188.991 kb on + strand, within BWI76_RS24900 at 5189.060 kb on + strand, within BWI76_RS24900 at 5189.135 kb on + strand, within BWI76_RS24900 at 5189.410 kb on - strand at 5189.450 kb on - strand at 5189.470 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X remove 5,186,795 - BWI76_RS24890 0.51 -0.4 5,186,815 - BWI76_RS24890 0.52 -0.1 5,186,865 - BWI76_RS24890 0.56 -0.1 5,187,146 - BWI76_RS24890 0.77 -0.4 5,187,150 - BWI76_RS24890 0.77 -0.3 5,187,205 - BWI76_RS24890 0.81 +0.3 5,187,219 + BWI76_RS24890 0.82 +1.2 5,187,285 + BWI76_RS24890 0.87 -0.0 5,187,285 + BWI76_RS24890 0.87 -1.4 5,187,323 + BWI76_RS24890 0.89 +0.6 5,187,348 - +0.2 5,187,368 + +0.2 5,187,476 - -0.1 5,187,530 - +0.5 5,187,530 - +0.3 5,187,621 - BWI76_RS24895 0.10 +0.4 5,187,899 - BWI76_RS24895 0.37 +0.4 5,188,147 + BWI76_RS24895 0.61 +0.0 5,188,147 + BWI76_RS24895 0.61 +0.9 5,188,286 + BWI76_RS24895 0.74 +0.1 5,188,324 - BWI76_RS24895 0.78 +0.2 5,188,389 - BWI76_RS24895 0.84 -0.0 5,188,500 + +0.3 5,188,674 + +0.1 5,188,833 + BWI76_RS24900 0.21 +0.3 5,188,991 + BWI76_RS24900 0.42 +2.5 5,189,060 + BWI76_RS24900 0.51 +0.6 5,189,135 + BWI76_RS24900 0.60 -0.0 5,189,410 - +0.2 5,189,450 - -0.0 5,189,470 + -0.1
Or see this region's nucleotide sequence