Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24625
Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 5,132,304 | - | -0.2 | |||
| 5,132,304 | - | +0.2 | |||
| 5,132,588 | - | -1.3 | |||
| 5,132,764 | - | +0.6 | |||
| 5,132,940 | + | BWI76_RS24620 | 0.69 | +0.1 | |
| 5,132,960 | - | BWI76_RS24620 | 0.72 | -0.4 | |
| 5,132,960 | - | BWI76_RS24620 | 0.72 | -0.7 | |
| 5,132,960 | - | BWI76_RS24620 | 0.72 | -0.4 | |
| 5,132,977 | + | BWI76_RS24620 | 0.75 | -0.1 | |
| 5,133,122 | - | -0.4 | |||
| 5,133,188 | - | -0.3 | |||
| 5,133,282 | + | BWI76_RS24625 | 0.29 | -0.2 | |
| 5,133,309 | + | BWI76_RS24625 | 0.43 | +0.2 | |
| 5,133,317 | - | BWI76_RS24625 | 0.47 | +0.8 | |
| 5,133,338 | + | -0.0 | |||
| 5,133,360 | + | -0.3 | |||
| 5,133,367 | - | +0.1 | |||
| 5,133,646 | + | BWI76_RS24630 | 0.23 | +0.2 | |
| 5,133,914 | + | BWI76_RS24630 | 0.42 | -0.3 | |
| 5,134,078 | - | BWI76_RS24630 | 0.53 | +0.3 | |
| 5,134,153 | + | BWI76_RS24630 | 0.59 | +0.8 | |
| 5,134,369 | - | BWI76_RS24630 | 0.74 | -1.0 | |
| 5,134,415 | - | BWI76_RS24630 | 0.77 | +0.3 |
Or see this region's nucleotide sequence