Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21690
Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
4,535,587 | + | BWI76_RS21675 | 0.88 | -0.2 | |
4,535,602 | + | -0.3 | |||
4,535,605 | - | +0.1 | |||
4,535,882 | - | BWI76_RS21680 | 0.68 | -0.1 | |
4,535,892 | + | BWI76_RS21680 | 0.71 | -1.0 | |
4,535,928 | - | BWI76_RS21680 | 0.81 | -0.0 | |
4,536,044 | - | -0.2 | |||
4,536,268 | - | BWI76_RS21685 | 0.59 | -0.1 | |
4,536,400 | + | +0.0 | |||
4,536,401 | + | -0.0 | |||
4,536,401 | + | -0.8 | |||
4,536,525 | - | -0.0 | |||
4,536,588 | + | BWI76_RS21690 | 0.28 | -1.3 | |
4,536,620 | + | BWI76_RS21690 | 0.38 | +0.7 | |
4,536,846 | - | +1.5 | |||
4,537,078 | + | BWI76_RS21695 | 0.12 | -1.7 | |
4,537,083 | + | BWI76_RS21695 | 0.13 | +0.7 | |
4,537,422 | + | BWI76_RS21695 | 0.47 | +0.1 | |
4,537,623 | + | BWI76_RS21695 | 0.67 | -1.0 | |
4,537,771 | - | BWI76_RS21695 | 0.82 | -0.1 | |
4,537,776 | + | BWI76_RS21695 | 0.83 | +0.2 | |
4,537,789 | + | BWI76_RS21695 | 0.84 | +0.1 |
Or see this region's nucleotide sequence