Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19040 and BWI76_RS19045 are separated by 37 nucleotides BWI76_RS19045 and BWI76_RS19050 are separated by 317 nucleotides
BWI76_RS19040: BWI76_RS19040 - hypothetical protein, at 3,954,217 to 3,955,347
_RS19040
BWI76_RS19045: BWI76_RS19045 - capsular polysaccharide biosynthesis protein, at 3,955,385 to 3,956,353
_RS19045
BWI76_RS19050: BWI76_RS19050 - NAD(P)-dependent oxidoreductase, at 3,956,671 to 3,957,525
_RS19050
Position (kb)
3955
3956
3957 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3954.461 kb on - strand, within BWI76_RS19040 at 3954.496 kb on - strand, within BWI76_RS19040 at 3954.496 kb on - strand, within BWI76_RS19040 at 3954.496 kb on - strand, within BWI76_RS19040 at 3954.506 kb on - strand, within BWI76_RS19040 at 3954.506 kb on - strand, within BWI76_RS19040 at 3954.714 kb on - strand, within BWI76_RS19040 at 3954.782 kb on - strand, within BWI76_RS19040 at 3955.187 kb on - strand, within BWI76_RS19040 at 3955.673 kb on - strand, within BWI76_RS19045 at 3955.800 kb on - strand, within BWI76_RS19045 at 3955.800 kb on - strand, within BWI76_RS19045 at 3955.810 kb on - strand, within BWI76_RS19045 at 3955.810 kb on - strand, within BWI76_RS19045 at 3955.810 kb on - strand, within BWI76_RS19045 at 3955.948 kb on - strand, within BWI76_RS19045 at 3955.967 kb on - strand, within BWI76_RS19045 at 3956.156 kb on - strand, within BWI76_RS19045 at 3956.169 kb on - strand, within BWI76_RS19045 at 3956.169 kb on - strand, within BWI76_RS19045 at 3956.286 kb on - strand at 3956.552 kb on - strand at 3956.578 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.677 kb on - strand at 3956.712 kb on - strand at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.757 kb on - strand, within BWI76_RS19050 at 3956.788 kb on - strand, within BWI76_RS19050 at 3956.794 kb on - strand, within BWI76_RS19050 at 3956.794 kb on - strand, within BWI76_RS19050 at 3956.815 kb on - strand, within BWI76_RS19050 at 3956.815 kb on - strand, within BWI76_RS19050 at 3956.970 kb on - strand, within BWI76_RS19050 at 3956.979 kb on - strand, within BWI76_RS19050 at 3956.979 kb on - strand, within BWI76_RS19050 at 3956.985 kb on - strand, within BWI76_RS19050 at 3956.989 kb on - strand, within BWI76_RS19050 at 3957.040 kb on - strand, within BWI76_RS19050 at 3957.040 kb on - strand, within BWI76_RS19050 at 3957.047 kb on - strand, within BWI76_RS19050 at 3957.206 kb on - strand at 3957.251 kb on - strand, within BWI76_RS19050 at 3957.331 kb on - strand, within BWI76_RS19050
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X remove 3,954,461 - BWI76_RS19040 0.22 -4.5 3,954,496 - BWI76_RS19040 0.25 -5.1 3,954,496 - BWI76_RS19040 0.25 -1.4 3,954,496 - BWI76_RS19040 0.25 -4.3 3,954,506 - BWI76_RS19040 0.26 -0.3 3,954,506 - BWI76_RS19040 0.26 -3.5 3,954,714 - BWI76_RS19040 0.44 -4.4 3,954,782 - BWI76_RS19040 0.50 -3.0 3,955,187 - BWI76_RS19040 0.86 -4.6 3,955,673 - BWI76_RS19045 0.30 -1.3 3,955,800 - BWI76_RS19045 0.43 -1.9 3,955,800 - BWI76_RS19045 0.43 -1.2 3,955,810 - BWI76_RS19045 0.44 -1.5 3,955,810 - BWI76_RS19045 0.44 -0.9 3,955,810 - BWI76_RS19045 0.44 -1.8 3,955,948 - BWI76_RS19045 0.58 -0.2 3,955,967 - BWI76_RS19045 0.60 -0.9 3,956,156 - BWI76_RS19045 0.80 -0.9 3,956,169 - BWI76_RS19045 0.81 -1.6 3,956,169 - BWI76_RS19045 0.81 -1.6 3,956,286 - -1.1 3,956,552 - +0.7 3,956,578 - +0.8 3,956,677 - -0.1 3,956,677 - -0.3 3,956,677 - -0.1 3,956,677 - +0.5 3,956,677 - -0.3 3,956,677 - +0.6 3,956,677 - +0.2 3,956,677 - -0.5 3,956,712 - -3.6 3,956,757 - BWI76_RS19050 0.10 -1.9 3,956,757 - BWI76_RS19050 0.10 -2.4 3,956,757 - BWI76_RS19050 0.10 -1.7 3,956,757 - BWI76_RS19050 0.10 -4.0 3,956,757 - BWI76_RS19050 0.10 -3.4 3,956,757 - BWI76_RS19050 0.10 -1.4 3,956,757 - BWI76_RS19050 0.10 -3.0 3,956,757 - BWI76_RS19050 0.10 -3.3 3,956,757 - BWI76_RS19050 0.10 -3.0 3,956,757 - BWI76_RS19050 0.10 -2.7 3,956,788 - BWI76_RS19050 0.14 -2.5 3,956,794 - BWI76_RS19050 0.14 -2.0 3,956,794 - BWI76_RS19050 0.14 -2.0 3,956,815 - BWI76_RS19050 0.17 -2.5 3,956,815 - BWI76_RS19050 0.17 -1.3 3,956,970 - BWI76_RS19050 0.35 -2.7 3,956,979 - BWI76_RS19050 0.36 -3.8 3,956,979 - BWI76_RS19050 0.36 -1.2 3,956,985 - BWI76_RS19050 0.37 -4.0 3,956,989 - BWI76_RS19050 0.37 -2.7 3,957,040 - BWI76_RS19050 0.43 -0.5 3,957,040 - BWI76_RS19050 0.43 -3.1 3,957,047 - BWI76_RS19050 0.44 -2.9 3,957,206 - +1.0 3,957,251 - BWI76_RS19050 0.68 -1.4 3,957,331 - BWI76_RS19050 0.77 -1.0
Or see this region's nucleotide sequence