Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15260

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS15255 and BWI76_RS15260 overlap by 4 nucleotidesBWI76_RS15260 and BWI76_RS15265 are separated by 19 nucleotides BWI76_RS15255: BWI76_RS15255 - hypothetical protein, at 3,197,158 to 3,198,330 _RS15255 BWI76_RS15260: BWI76_RS15260 - hypothetical protein, at 3,198,327 to 3,198,797 _RS15260 BWI76_RS15265: BWI76_RS15265 - hypothetical protein, at 3,198,817 to 3,200,097 _RS15265 Position (kb) 3198 3199Strain fitness (log2 ratio) -1 0 1at 3197.361 kb on + strand, within BWI76_RS15255at 3197.373 kb on + strand, within BWI76_RS15255at 3197.457 kb on + strand, within BWI76_RS15255at 3197.481 kb on + strand, within BWI76_RS15255at 3197.516 kb on + strand, within BWI76_RS15255at 3197.555 kb on + strand, within BWI76_RS15255at 3197.563 kb on - strand, within BWI76_RS15255at 3197.605 kb on + strand, within BWI76_RS15255at 3197.695 kb on + strand, within BWI76_RS15255at 3198.582 kb on + strand, within BWI76_RS15260at 3199.228 kb on - strand, within BWI76_RS15265at 3199.362 kb on + strand, within BWI76_RS15265at 3199.771 kb on + strand, within BWI76_RS15265

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
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3,197,361 + BWI76_RS15255 0.17 +0.3
3,197,373 + BWI76_RS15255 0.18 +0.2
3,197,457 + BWI76_RS15255 0.25 +0.0
3,197,481 + BWI76_RS15255 0.28 +0.2
3,197,516 + BWI76_RS15255 0.31 +0.1
3,197,555 + BWI76_RS15255 0.34 -0.4
3,197,563 - BWI76_RS15255 0.35 -0.3
3,197,605 + BWI76_RS15255 0.38 +0.1
3,197,695 + BWI76_RS15255 0.46 +1.0
3,198,582 + BWI76_RS15260 0.54 +0.4
3,199,228 - BWI76_RS15265 0.32 -0.1
3,199,362 + BWI76_RS15265 0.43 +0.3
3,199,771 + BWI76_RS15265 0.74 +0.1

Or see this region's nucleotide sequence