Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12360 and BWI76_RS12365 are separated by 102 nucleotides BWI76_RS12365 and BWI76_RS12370 are separated by 6 nucleotides BWI76_RS12370 and BWI76_RS12375 are separated by 91 nucleotides
BWI76_RS12360: BWI76_RS12360 - hypothetical protein, at 2,581,854 to 2,582,462
_RS12360
BWI76_RS12365: BWI76_RS12365 - hypothetical protein, at 2,582,565 to 2,583,362
_RS12365
BWI76_RS12370: BWI76_RS12370 - hypothetical protein, at 2,583,369 to 2,585,315
_RS12370
BWI76_RS12375: BWI76_RS12375 - DNA-invertase hin, at 2,585,407 to 2,585,958
_RS12375
Position (kb)
2583
2584
2585
2586 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2582.372 kb on + strand, within BWI76_RS12360 at 2582.375 kb on - strand, within BWI76_RS12360 at 2582.377 kb on + strand, within BWI76_RS12360 at 2582.385 kb on - strand, within BWI76_RS12360 at 2582.385 kb on - strand, within BWI76_RS12360 at 2582.387 kb on + strand, within BWI76_RS12360 at 2582.387 kb on + strand, within BWI76_RS12360 at 2582.395 kb on - strand, within BWI76_RS12360 at 2582.472 kb on - strand at 2582.526 kb on - strand at 2582.538 kb on + strand at 2582.552 kb on - strand at 2582.562 kb on - strand at 2582.592 kb on + strand at 2582.603 kb on + strand at 2582.611 kb on - strand at 2582.611 kb on - strand at 2582.611 kb on - strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.613 kb on + strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.621 kb on - strand at 2582.626 kb on - strand at 2582.629 kb on + strand at 2582.629 kb on + strand at 2582.629 kb on + strand at 2582.629 kb on + strand at 2582.629 kb on + strand at 2582.637 kb on - strand at 2582.637 kb on - strand at 2582.637 kb on - strand at 2582.637 kb on - strand at 2582.637 kb on - strand at 2582.637 kb on - strand at 2582.637 kb on - strand at 2582.637 kb on - strand at 2582.640 kb on + strand at 2582.643 kb on - strand at 2582.750 kb on - strand, within BWI76_RS12365 at 2582.750 kb on - strand, within BWI76_RS12365 at 2582.784 kb on + strand, within BWI76_RS12365 at 2582.792 kb on - strand, within BWI76_RS12365 at 2582.792 kb on - strand, within BWI76_RS12365 at 2582.807 kb on - strand, within BWI76_RS12365 at 2582.871 kb on + strand, within BWI76_RS12365 at 2582.871 kb on + strand, within BWI76_RS12365 at 2582.871 kb on + strand, within BWI76_RS12365 at 2582.871 kb on + strand, within BWI76_RS12365 at 2582.871 kb on + strand, within BWI76_RS12365 at 2582.871 kb on + strand, within BWI76_RS12365 at 2582.871 kb on + strand, within BWI76_RS12365 at 2582.871 kb on + strand, within BWI76_RS12365 at 2582.889 kb on - strand, within BWI76_RS12365 at 2582.917 kb on + strand, within BWI76_RS12365 at 2583.108 kb on - strand, within BWI76_RS12365 at 2583.253 kb on + strand, within BWI76_RS12365 at 2583.253 kb on + strand, within BWI76_RS12365 at 2583.253 kb on + strand, within BWI76_RS12365 at 2583.261 kb on - strand, within BWI76_RS12365 at 2583.261 kb on - strand, within BWI76_RS12365 at 2583.278 kb on + strand, within BWI76_RS12365 at 2583.316 kb on - strand at 2583.321 kb on - strand at 2583.496 kb on - strand at 2583.602 kb on + strand, within BWI76_RS12370 at 2583.693 kb on - strand, within BWI76_RS12370 at 2583.747 kb on - strand, within BWI76_RS12370 at 2583.748 kb on - strand, within BWI76_RS12370 at 2583.991 kb on - strand, within BWI76_RS12370 at 2584.000 kb on - strand, within BWI76_RS12370 at 2584.077 kb on + strand, within BWI76_RS12370 at 2584.077 kb on + strand, within BWI76_RS12370 at 2584.152 kb on - strand, within BWI76_RS12370 at 2584.227 kb on - strand, within BWI76_RS12370 at 2584.244 kb on - strand, within BWI76_RS12370 at 2584.362 kb on - strand, within BWI76_RS12370 at 2584.559 kb on - strand, within BWI76_RS12370 at 2584.563 kb on + strand, within BWI76_RS12370 at 2584.564 kb on - strand, within BWI76_RS12370 at 2584.773 kb on - strand, within BWI76_RS12370 at 2584.773 kb on - strand, within BWI76_RS12370 at 2584.965 kb on - strand, within BWI76_RS12370 at 2585.108 kb on + strand, within BWI76_RS12370 at 2585.211 kb on + strand at 2585.536 kb on + strand, within BWI76_RS12375 at 2585.614 kb on - strand, within BWI76_RS12375 at 2585.644 kb on - strand, within BWI76_RS12375 at 2585.800 kb on + strand, within BWI76_RS12375 at 2586.058 kb on - strand at 2586.071 kb on + strand at 2586.188 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X remove 2,582,372 + BWI76_RS12360 0.85 -1.1 2,582,375 - BWI76_RS12360 0.86 -1.3 2,582,377 + BWI76_RS12360 0.86 -1.2 2,582,385 - BWI76_RS12360 0.87 -1.5 2,582,385 - BWI76_RS12360 0.87 -1.4 2,582,387 + BWI76_RS12360 0.88 -0.4 2,582,387 + BWI76_RS12360 0.88 -1.3 2,582,395 - BWI76_RS12360 0.89 -0.4 2,582,472 - -0.9 2,582,526 - -2.6 2,582,538 + -0.8 2,582,552 - -2.5 2,582,562 - -0.7 2,582,592 + -0.8 2,582,603 + -0.4 2,582,611 - -0.8 2,582,611 - -0.9 2,582,611 - -0.9 2,582,613 + -2.1 2,582,613 + -0.1 2,582,613 + -1.3 2,582,613 + -0.4 2,582,613 + -0.8 2,582,613 + -1.4 2,582,613 + -0.4 2,582,613 + -0.2 2,582,613 + -0.5 2,582,613 + -1.5 2,582,613 + -2.2 2,582,613 + -0.7 2,582,613 + -0.5 2,582,621 - -1.1 2,582,621 - -0.4 2,582,621 - -0.7 2,582,621 - -1.6 2,582,621 - -1.2 2,582,621 - -0.1 2,582,621 - -0.8 2,582,621 - -0.8 2,582,621 - -0.9 2,582,621 - +0.2 2,582,621 - -1.9 2,582,621 - -0.1 2,582,621 - -0.0 2,582,626 - -0.6 2,582,629 + -0.7 2,582,629 + -1.3 2,582,629 + -1.7 2,582,629 + -1.3 2,582,629 + -2.8 2,582,637 - -1.1 2,582,637 - -0.8 2,582,637 - -0.8 2,582,637 - -1.5 2,582,637 - -0.6 2,582,637 - -1.1 2,582,637 - -0.8 2,582,637 - -0.6 2,582,640 + -0.4 2,582,643 - -0.6 2,582,750 - BWI76_RS12365 0.23 -1.6 2,582,750 - BWI76_RS12365 0.23 -0.9 2,582,784 + BWI76_RS12365 0.27 -1.3 2,582,792 - BWI76_RS12365 0.28 -0.4 2,582,792 - BWI76_RS12365 0.28 -0.9 2,582,807 - BWI76_RS12365 0.30 -1.0 2,582,871 + BWI76_RS12365 0.38 -0.5 2,582,871 + BWI76_RS12365 0.38 -0.5 2,582,871 + BWI76_RS12365 0.38 -2.3 2,582,871 + BWI76_RS12365 0.38 -1.2 2,582,871 + BWI76_RS12365 0.38 +0.6 2,582,871 + BWI76_RS12365 0.38 -0.5 2,582,871 + BWI76_RS12365 0.38 -1.1 2,582,871 + BWI76_RS12365 0.38 -0.3 2,582,889 - BWI76_RS12365 0.41 -0.8 2,582,917 + BWI76_RS12365 0.44 -0.5 2,583,108 - BWI76_RS12365 0.68 -0.9 2,583,253 + BWI76_RS12365 0.86 -0.6 2,583,253 + BWI76_RS12365 0.86 -2.0 2,583,253 + BWI76_RS12365 0.86 -1.2 2,583,261 - BWI76_RS12365 0.87 -1.3 2,583,261 - BWI76_RS12365 0.87 -1.3 2,583,278 + BWI76_RS12365 0.89 -0.6 2,583,316 - -0.4 2,583,321 - -1.0 2,583,496 - -1.0 2,583,602 + BWI76_RS12370 0.12 -2.2 2,583,693 - BWI76_RS12370 0.17 -0.0 2,583,747 - BWI76_RS12370 0.19 -1.1 2,583,748 - BWI76_RS12370 0.19 -0.6 2,583,991 - BWI76_RS12370 0.32 -0.6 2,584,000 - BWI76_RS12370 0.32 -0.8 2,584,077 + BWI76_RS12370 0.36 -1.4 2,584,077 + BWI76_RS12370 0.36 -1.1 2,584,152 - BWI76_RS12370 0.40 -0.8 2,584,227 - BWI76_RS12370 0.44 -3.2 2,584,244 - BWI76_RS12370 0.45 -0.8 2,584,362 - BWI76_RS12370 0.51 -1.9 2,584,559 - BWI76_RS12370 0.61 -0.8 2,584,563 + BWI76_RS12370 0.61 -0.5 2,584,564 - BWI76_RS12370 0.61 -0.8 2,584,773 - BWI76_RS12370 0.72 -1.4 2,584,773 - BWI76_RS12370 0.72 -0.6 2,584,965 - BWI76_RS12370 0.82 -0.9 2,585,108 + BWI76_RS12370 0.89 -1.4 2,585,211 + -0.9 2,585,536 + BWI76_RS12375 0.23 -0.5 2,585,614 - BWI76_RS12375 0.38 -0.8 2,585,644 - BWI76_RS12375 0.43 +0.0 2,585,800 + BWI76_RS12375 0.71 +0.1 2,586,058 - -0.5 2,586,071 + -1.4 2,586,188 - -0.7
Or see this region's nucleotide sequence