Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12255 and BWI76_RS12260 overlap by 17 nucleotides BWI76_RS12260 and BWI76_RS12265 are separated by 106 nucleotides BWI76_RS12265 and BWI76_RS12270 are separated by 87 nucleotides
BWI76_RS12255: BWI76_RS12255 - hypothetical protein, at 2,560,994 to 2,562,418
_RS12255
BWI76_RS12260: BWI76_RS12260 - hypothetical protein, at 2,562,402 to 2,563,514
_RS12260
BWI76_RS12265: BWI76_RS12265 - hypothetical protein, at 2,563,621 to 2,564,385
_RS12265
BWI76_RS12270: BWI76_RS12270 - hypothetical protein, at 2,564,473 to 2,565,609
_RS12270
Position (kb)
2562
2563
2564 Strain fitness (log2 ratio)
-2
-1
0
1 at 2561.446 kb on + strand, within BWI76_RS12255 at 2561.446 kb on + strand, within BWI76_RS12255 at 2561.454 kb on - strand, within BWI76_RS12255 at 2561.477 kb on - strand, within BWI76_RS12255 at 2561.650 kb on + strand, within BWI76_RS12255 at 2561.717 kb on + strand, within BWI76_RS12255 at 2561.783 kb on - strand, within BWI76_RS12255 at 2561.784 kb on + strand, within BWI76_RS12255 at 2561.794 kb on + strand, within BWI76_RS12255 at 2562.083 kb on + strand, within BWI76_RS12255 at 2562.083 kb on + strand, within BWI76_RS12255 at 2562.091 kb on - strand, within BWI76_RS12255 at 2562.382 kb on + strand at 2562.390 kb on - strand at 2562.390 kb on - strand at 2562.607 kb on - strand, within BWI76_RS12260 at 2562.931 kb on - strand, within BWI76_RS12260 at 2563.018 kb on - strand, within BWI76_RS12260 at 2563.113 kb on - strand, within BWI76_RS12260 at 2563.173 kb on - strand, within BWI76_RS12260 at 2563.459 kb on + strand at 2563.729 kb on + strand, within BWI76_RS12265 at 2563.737 kb on - strand, within BWI76_RS12265 at 2563.917 kb on + strand, within BWI76_RS12265 at 2563.917 kb on + strand, within BWI76_RS12265 at 2563.917 kb on + strand, within BWI76_RS12265 at 2563.969 kb on - strand, within BWI76_RS12265 at 2564.325 kb on - strand at 2564.464 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X remove 2,561,446 + BWI76_RS12255 0.32 -1.0 2,561,446 + BWI76_RS12255 0.32 -1.4 2,561,454 - BWI76_RS12255 0.32 -1.9 2,561,477 - BWI76_RS12255 0.34 -2.4 2,561,650 + BWI76_RS12255 0.46 -1.7 2,561,717 + BWI76_RS12255 0.51 -1.6 2,561,783 - BWI76_RS12255 0.55 -1.9 2,561,784 + BWI76_RS12255 0.55 -2.1 2,561,794 + BWI76_RS12255 0.56 -2.5 2,562,083 + BWI76_RS12255 0.76 -1.1 2,562,083 + BWI76_RS12255 0.76 -0.9 2,562,091 - BWI76_RS12255 0.77 -2.2 2,562,382 + -0.6 2,562,390 - -1.5 2,562,390 - -1.9 2,562,607 - BWI76_RS12260 0.18 -0.8 2,562,931 - BWI76_RS12260 0.48 -1.2 2,563,018 - BWI76_RS12260 0.55 -1.7 2,563,113 - BWI76_RS12260 0.64 -1.0 2,563,173 - BWI76_RS12260 0.69 -1.9 2,563,459 + -0.6 2,563,729 + BWI76_RS12265 0.14 -1.4 2,563,737 - BWI76_RS12265 0.15 -1.1 2,563,917 + BWI76_RS12265 0.39 -1.6 2,563,917 + BWI76_RS12265 0.39 -1.6 2,563,917 + BWI76_RS12265 0.39 -1.3 2,563,969 - BWI76_RS12265 0.45 -1.7 2,564,325 - -1.6 2,564,464 + -0.9
Or see this region's nucleotide sequence