Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12260

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS12255 and BWI76_RS12260 overlap by 17 nucleotidesBWI76_RS12260 and BWI76_RS12265 are separated by 106 nucleotidesBWI76_RS12265 and BWI76_RS12270 are separated by 87 nucleotides BWI76_RS12255: BWI76_RS12255 - hypothetical protein, at 2,560,994 to 2,562,418 _RS12255 BWI76_RS12260: BWI76_RS12260 - hypothetical protein, at 2,562,402 to 2,563,514 _RS12260 BWI76_RS12265: BWI76_RS12265 - hypothetical protein, at 2,563,621 to 2,564,385 _RS12265 BWI76_RS12270: BWI76_RS12270 - hypothetical protein, at 2,564,473 to 2,565,609 _RS12270 Position (kb) 2562 2563 2564Strain fitness (log2 ratio) -2 -1 0 1at 2561.446 kb on + strand, within BWI76_RS12255at 2561.446 kb on + strand, within BWI76_RS12255at 2561.454 kb on - strand, within BWI76_RS12255at 2561.477 kb on - strand, within BWI76_RS12255at 2561.650 kb on + strand, within BWI76_RS12255at 2561.717 kb on + strand, within BWI76_RS12255at 2561.783 kb on - strand, within BWI76_RS12255at 2561.784 kb on + strand, within BWI76_RS12255at 2561.794 kb on + strand, within BWI76_RS12255at 2562.083 kb on + strand, within BWI76_RS12255at 2562.083 kb on + strand, within BWI76_RS12255at 2562.091 kb on - strand, within BWI76_RS12255at 2562.382 kb on + strandat 2562.390 kb on - strandat 2562.390 kb on - strandat 2562.607 kb on - strand, within BWI76_RS12260at 2562.931 kb on - strand, within BWI76_RS12260at 2563.018 kb on - strand, within BWI76_RS12260at 2563.113 kb on - strand, within BWI76_RS12260at 2563.173 kb on - strand, within BWI76_RS12260at 2563.459 kb on + strandat 2563.729 kb on + strand, within BWI76_RS12265at 2563.737 kb on - strand, within BWI76_RS12265at 2563.917 kb on + strand, within BWI76_RS12265at 2563.917 kb on + strand, within BWI76_RS12265at 2563.917 kb on + strand, within BWI76_RS12265at 2563.969 kb on - strand, within BWI76_RS12265at 2564.325 kb on - strandat 2564.464 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
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2,561,446 + BWI76_RS12255 0.32 -1.0
2,561,446 + BWI76_RS12255 0.32 -1.4
2,561,454 - BWI76_RS12255 0.32 -1.9
2,561,477 - BWI76_RS12255 0.34 -2.4
2,561,650 + BWI76_RS12255 0.46 -1.7
2,561,717 + BWI76_RS12255 0.51 -1.6
2,561,783 - BWI76_RS12255 0.55 -1.9
2,561,784 + BWI76_RS12255 0.55 -2.1
2,561,794 + BWI76_RS12255 0.56 -2.5
2,562,083 + BWI76_RS12255 0.76 -1.1
2,562,083 + BWI76_RS12255 0.76 -0.9
2,562,091 - BWI76_RS12255 0.77 -2.2
2,562,382 + -0.6
2,562,390 - -1.5
2,562,390 - -1.9
2,562,607 - BWI76_RS12260 0.18 -0.8
2,562,931 - BWI76_RS12260 0.48 -1.2
2,563,018 - BWI76_RS12260 0.55 -1.7
2,563,113 - BWI76_RS12260 0.64 -1.0
2,563,173 - BWI76_RS12260 0.69 -1.9
2,563,459 + -0.6
2,563,729 + BWI76_RS12265 0.14 -1.4
2,563,737 - BWI76_RS12265 0.15 -1.1
2,563,917 + BWI76_RS12265 0.39 -1.6
2,563,917 + BWI76_RS12265 0.39 -1.6
2,563,917 + BWI76_RS12265 0.39 -1.3
2,563,969 - BWI76_RS12265 0.45 -1.7
2,564,325 - -1.6
2,564,464 + -0.9

Or see this region's nucleotide sequence